Gene Cphamn1_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2201 
Symbol 
ID6375895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2379551 
End bp2380597 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content49% 
IMG OID642684688 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_001960587 
Protein GI189501117 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.638698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAGC TTCAGAAGGA CATCGCATCG GGAAATATCG CGCCGATATA TTTTTTTCAC 
GGCCCCGAGA GTTTTATGAA AGAGGAGCTC ACTGATCTCG TCAGGAAAAA CACGTTCCCT
GCGGAAGAAG ACGCAGCTGT AAACACCACC GTGCTCTATG GACAGGATGT CACTCCGGGA
GAGATTGTCT CGATGGCGTC GGAATTTCCC ATGTTCACCG CCCGAAAGCT GATGATCGTC
AAGCAGTTCG ACAAGTTCAA AAAGCAGGGA TCGAGAGACA AACAAAAACT GCATATCGAC
CAGTTCATCC GGTATACCAA CAGCCCGGCT CTTTCAACGA TACTTATACT TGACGCCGAC
CAGATCGACA AAAGGGATCT GCAGAAAGCC CCCTTCAGGG AACTGCAGCC TTTTCGACAT
GATTTCCCTC TGGTTACAAA CCCCGACATC TTTGCTTCCG ACCGGGCATC TCTCTATGGG
TGGGAGTTCG AACCGGAAGC CCTGAAAGCA TTCAGCGCGT ATATACAGCC ATCTTCGCGA
GAGATAGCCA GAGAAGTGGA AAAACTCGTC ATGTACGCGT CCTCAAAAAG CAATGAAAAA
CGCATTACCG GTGCCGACGT TTTCGAGTGC GTCGGTATAT CGAAACAGTA TAATGTCTTT
GAGCTTGAAA AAGCGCTTGC AGGAAAAAAT GTACGGCTCT GCAGCGGTAT ATCACTGATG
ATCATGGACC GGGAAGGGCA GAAAGAAGGG CTGATGAATA TCGTTCGCTA CCTGACGACC
TTTTATATGA GAATCTGGAA GCTCCACTCT CCCGGATCCC GCCAATTGCC TCTTTCAGAG
ACAGCCAAAC TGCTCGGCAT GTTCGGAAAA CAGGAATATT TCGCAAAAAA CTACCTGAAC
TATGCCTCGC GGTTCTCACT GAAGGACACC GAAAACGCCA TTCTGTCCCT GCATCAAACC
GATGCCGCCC TCAAAGGACT GGAAACCTAT CCGGACGAAA AATACCTCCT TCTGCGTTTG
ATGCAGCAGC TTTTAAGTCA AAAGTAA
 
Protein sequence
MKKLQKDIAS GNIAPIYFFH GPESFMKEEL TDLVRKNTFP AEEDAAVNTT VLYGQDVTPG 
EIVSMASEFP MFTARKLMIV KQFDKFKKQG SRDKQKLHID QFIRYTNSPA LSTILILDAD
QIDKRDLQKA PFRELQPFRH DFPLVTNPDI FASDRASLYG WEFEPEALKA FSAYIQPSSR
EIAREVEKLV MYASSKSNEK RITGADVFEC VGISKQYNVF ELEKALAGKN VRLCSGISLM
IMDREGQKEG LMNIVRYLTT FYMRIWKLHS PGSRQLPLSE TAKLLGMFGK QEYFAKNYLN
YASRFSLKDT ENAILSLHQT DAALKGLETY PDEKYLLLRL MQQLLSQK