| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2078 |
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| Symbol | |
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| ID | 6375772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 2243914 |
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| End bp | 2245011 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642684569 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001960468 |
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| Protein GI | 189500998 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR01927] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.310676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCCGC AAAACGCTTC CATATACCGC TATTCCATCC CTTTTGTCAG GCCGGTTCCC
GTTCTCGGCA AAAGCCTCGA CACAAGGGAT GGTTTTGTTC TGGCCCTGAA GTCCGGAGAC
GGACTGCACA CCGGCTTCGG AGAAATAGCA CCTCTTCCGG GCCTTCATAA AGAATCACTC
CCTGAAGCCC TTGAGCAATG CAAGTCGCTT CTCCTTTCGT CCGATCTTTC TTATGGCGGG
CTATCGCTTG AAGATGCAGG CAAGCAGCTT CCCGAAAGCA TATCCCCTTC CGTTCGAGCA
GGCTTTGAGA TGGCACTGCT CAACCTGCAG TCGGCTGCCT CGGGAGCACT TCCCTCACTC
CCCGGCGCGC CGGAAGCAGC ACGAAAACTG CCCCTTAACG CGCTGCTGTT CGGTGATGCG
ACTTCAGTGA TCTCCATGGC AAAAGACTAT TTCCGGAATG GATACCGCAC CTTCAAGCTC
AAAGTACAGG CCTCGGACCC AGGCCTTGCC GTCAAACAGG TGCTTGCGCT TCGCTCCGCC
TTCGGCGGTG AGATTTCCCT GCGCCTCGAC AGCAACCGGT CGTTCGATCT GGAGAAGGCC
TGCCTCTTTT TCAACCGGAT TCCGGCTGAC AGCATCGAAT ACATCGAGGA ACCGCTTGCC
GATCCCTTCC TTATCCCGGA ATTCTTCAGC CGTACCGGCA TCCGCTCAGC GCTCGACGAA
TCACTCTGGA TGAGCCCCGG CATATGGAAC GGCATAGCAC GCAACTGCCT CGGCGGCGTT
GTCCTTAAAC CGGCGCGTCT GGGAAGTTTC GCAACAACAG TGCGCCTGGC CAGGGAAGCT
CGGGATGCAG GCATTGCCGC GGTCATAAGC GCCGCCTTCG AATCAGGCAT CGCTCTGGGA
TTCTACGCTC ATCTGGCATC TGTCCTATCG AAAAATCCGG ACCCCTGCGG TCTTGATACC
TTCAGGCAGC TCAGCCGGGA CATCCTTTAC AAACCGCTGC ACGCCGAATC GGGCTGCCTC
GATACCGAAA CAGCTTACCG CAACAGCCTC AACCCGGATC TTTCGAGACT CAAACTCATT
GAAGCATGGA CCTTGTAG
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| Protein sequence | MKPQNASIYR YSIPFVRPVP VLGKSLDTRD GFVLALKSGD GLHTGFGEIA PLPGLHKESL
PEALEQCKSL LLSSDLSYGG LSLEDAGKQL PESISPSVRA GFEMALLNLQ SAASGALPSL
PGAPEAARKL PLNALLFGDA TSVISMAKDY FRNGYRTFKL KVQASDPGLA VKQVLALRSA
FGGEISLRLD SNRSFDLEKA CLFFNRIPAD SIEYIEEPLA DPFLIPEFFS RTGIRSALDE
SLWMSPGIWN GIARNCLGGV VLKPARLGSF ATTVRLAREA RDAGIAAVIS AAFESGIALG
FYAHLASVLS KNPDPCGLDT FRQLSRDILY KPLHAESGCL DTETAYRNSL NPDLSRLKLI
EAWTL
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