Gene Cphamn1_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1929 
Symbol 
ID6375621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2094543 
End bp2095817 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content31% 
IMG OID642684423 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_001960324 
Protein GI189500854 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.109004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.370568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGAGA GTTTAAAAGA ATTGAATAAG AATGCTGAAC TTAAAAAGCT TTTTGGTAAT 
TATCTGTCAT TATTTTCTTT ACAAGGAATA AATTATTTAC TTCTTATAGT AACACTGCCC
TATCTTGTTA GAGTTCTTGG TCCTGAAAAG TATGGTCTTA TATCCTTTGC GATGGCTATA
ACGGTATATA TGCAGATTGT TACGGATTTT GGTTTTAATT TGACGGCTAC ACGAGATGTT
TCTGTTAATA GAGGCGATAA TAATAGAATA TCTGTTATTT ATGGGTCTGT GTTTGTTATA
AAAGCTGCAC TTGTTATAAT TTGTTTTATT GTTTTTTTTC TTGTTTCTGT TTTTGTGAAT
AGGATAAAGG TTGAATGGCT ATTTTATCTT ATGTGGTATG GTGTTGTTAT TGGAAATGCT
CTTATGCCAA TATGGTTGTT TCAGGGCCTT GAATCTATGC GTTATGTGGC AAAGGTCAAT
ATAATGGTAA AGTTGATATT TTCATTTCTT ATATTTGTTT TCGTAAGAAA GAGCTCTGAT
TATATATTGG TTCCTGTTTT GAATTCAGTG GGATATGTCT CTGTTGGTTT ATGGTCTTTG
TATTTGGTTA AGAAGGATTT TAAGATTAAA ATGATAGTCC CTAAATTTAA TGATATAAAG
CACTATTTTT TTGATGGGTT GTATGTGTTT GTGTCAAATG TTTCTGTTAG TATGTATACT
GCTTCGTCAG TTATAATCCT TGGTATAATG ACAAATAATA CATTTGTTGG TTATTATGCT
GCTGGCGAAA AAGTGATACA GGCTGTTCTT GGCGTTATGA CGCCATTTTA CAGGGCAATA
TATCCATACA ACGCAAGAAA AATTAATGAA AGTGTAGAAG AAGGGTTAAA AAATATACGA
ATAATGGCAC GAATTGTTGG TGTGTTAATG TTTATTATAG GTGCCCTTTT GTATTTGTTG
TCTGAAAAAA TTGTATTAAT TGTTCTGGGT CCTGATTATT ATAATTCTGT TCGTGTTGTA
AAGATTTTGT CATTTGTGCC TTTGTTTAGT GGGCTCTCCA ATATGCTTGG TGTACAAACT
ATGCTTAATC TAAATATGAA AAAAATATTT GCAAATACTA TGGTTTTTTT AAGTGTTATA
AATGTTCCGA TCTCGGTTAT ACTTGTTTAT AATATGGGTT ATGCTGGCTC AGCATATGCA
TTATTTTTTA TTGAATCCAT AGGGACCATC ATGATGATGT ATTTCTTGAG GGTAAAAAAA
ATTAAGGTTA TATAA
 
Protein sequence
MIESLKELNK NAELKKLFGN YLSLFSLQGI NYLLLIVTLP YLVRVLGPEK YGLISFAMAI 
TVYMQIVTDF GFNLTATRDV SVNRGDNNRI SVIYGSVFVI KAALVIICFI VFFLVSVFVN
RIKVEWLFYL MWYGVVIGNA LMPIWLFQGL ESMRYVAKVN IMVKLIFSFL IFVFVRKSSD
YILVPVLNSV GYVSVGLWSL YLVKKDFKIK MIVPKFNDIK HYFFDGLYVF VSNVSVSMYT
ASSVIILGIM TNNTFVGYYA AGEKVIQAVL GVMTPFYRAI YPYNARKINE SVEEGLKNIR
IMARIVGVLM FIIGALLYLL SEKIVLIVLG PDYYNSVRVV KILSFVPLFS GLSNMLGVQT
MLNLNMKKIF ANTMVFLSVI NVPISVILVY NMGYAGSAYA LFFIESIGTI MMMYFLRVKK
IKVI