Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1929 |
Symbol | |
ID | 6375621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2094543 |
End bp | 2095817 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642684423 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001960324 |
Protein GI | 189500854 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.109004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.370568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAGAGA GTTTAAAAGA ATTGAATAAG AATGCTGAAC TTAAAAAGCT TTTTGGTAAT TATCTGTCAT TATTTTCTTT ACAAGGAATA AATTATTTAC TTCTTATAGT AACACTGCCC TATCTTGTTA GAGTTCTTGG TCCTGAAAAG TATGGTCTTA TATCCTTTGC GATGGCTATA ACGGTATATA TGCAGATTGT TACGGATTTT GGTTTTAATT TGACGGCTAC ACGAGATGTT TCTGTTAATA GAGGCGATAA TAATAGAATA TCTGTTATTT ATGGGTCTGT GTTTGTTATA AAAGCTGCAC TTGTTATAAT TTGTTTTATT GTTTTTTTTC TTGTTTCTGT TTTTGTGAAT AGGATAAAGG TTGAATGGCT ATTTTATCTT ATGTGGTATG GTGTTGTTAT TGGAAATGCT CTTATGCCAA TATGGTTGTT TCAGGGCCTT GAATCTATGC GTTATGTGGC AAAGGTCAAT ATAATGGTAA AGTTGATATT TTCATTTCTT ATATTTGTTT TCGTAAGAAA GAGCTCTGAT TATATATTGG TTCCTGTTTT GAATTCAGTG GGATATGTCT CTGTTGGTTT ATGGTCTTTG TATTTGGTTA AGAAGGATTT TAAGATTAAA ATGATAGTCC CTAAATTTAA TGATATAAAG CACTATTTTT TTGATGGGTT GTATGTGTTT GTGTCAAATG TTTCTGTTAG TATGTATACT GCTTCGTCAG TTATAATCCT TGGTATAATG ACAAATAATA CATTTGTTGG TTATTATGCT GCTGGCGAAA AAGTGATACA GGCTGTTCTT GGCGTTATGA CGCCATTTTA CAGGGCAATA TATCCATACA ACGCAAGAAA AATTAATGAA AGTGTAGAAG AAGGGTTAAA AAATATACGA ATAATGGCAC GAATTGTTGG TGTGTTAATG TTTATTATAG GTGCCCTTTT GTATTTGTTG TCTGAAAAAA TTGTATTAAT TGTTCTGGGT CCTGATTATT ATAATTCTGT TCGTGTTGTA AAGATTTTGT CATTTGTGCC TTTGTTTAGT GGGCTCTCCA ATATGCTTGG TGTACAAACT ATGCTTAATC TAAATATGAA AAAAATATTT GCAAATACTA TGGTTTTTTT AAGTGTTATA AATGTTCCGA TCTCGGTTAT ACTTGTTTAT AATATGGGTT ATGCTGGCTC AGCATATGCA TTATTTTTTA TTGAATCCAT AGGGACCATC ATGATGATGT ATTTCTTGAG GGTAAAAAAA ATTAAGGTTA TATAA
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Protein sequence | MIESLKELNK NAELKKLFGN YLSLFSLQGI NYLLLIVTLP YLVRVLGPEK YGLISFAMAI TVYMQIVTDF GFNLTATRDV SVNRGDNNRI SVIYGSVFVI KAALVIICFI VFFLVSVFVN RIKVEWLFYL MWYGVVIGNA LMPIWLFQGL ESMRYVAKVN IMVKLIFSFL IFVFVRKSSD YILVPVLNSV GYVSVGLWSL YLVKKDFKIK MIVPKFNDIK HYFFDGLYVF VSNVSVSMYT ASSVIILGIM TNNTFVGYYA AGEKVIQAVL GVMTPFYRAI YPYNARKINE SVEEGLKNIR IMARIVGVLM FIIGALLYLL SEKIVLIVLG PDYYNSVRVV KILSFVPLFS GLSNMLGVQT MLNLNMKKIF ANTMVFLSVI NVPISVILVY NMGYAGSAYA LFFIESIGTI MMMYFLRVKK IKVI
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