Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1872 |
Symbol | |
ID | 6375563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2029075 |
End bp | 2029809 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642684368 |
Product | ABC transporter-related protein |
Protein accession | YP_001960270 |
Protein GI | 189500800 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00971328 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCGAAC TGCAGGATAT AACCTTACGA TACGGCACAC GGGAAATACT CGACAATGTT TCCCTCACTA TCGAGGACAA CAAGATCAAG GCGGTTCTCG GCCCCAGCGG TGTAGGAAAA AGCACCATTC TGAAACTCAT TCTCGGCCTC ATAAAACCGA ACTGCGGAAA AATACTGATT GACGGCGTCG ATATCACGCA GCTGAAAGAG TCTCAGCTCT ACCCGATTCG ACGCAAGATG GGCATCGTAT TTCAGGGAAA CGCGCTGTTC GACTCAATGA GCATCAGTGA AAACCTCGGA TTTTTTTTAC GTGAAAACCT TAAATTATCT GAAAAAGAGA CTGAACGGAG AGTCGCTGAA CAGATCGCCT TTGCAGGACT TGAAGGCTAT GAAGACTCTC TGCCTGAAAA CCTGAGCGGG GGAATGAAAA AACGGGTCGC CATCGGCAGA GCGCTTATCT TCAATCCGAA AATGATTCTG TTTGACGAAC CTACAGCAGG ACTGGATCCG GTCAGTTCAA AAAAAATCCT TGGACTGATC AGCTCCCTGA GAAATAAAAG TGATCTCGGC GCAGCCATAG TCACCCATAT TATTGACGAC GTTTTTCAGG TTGCCGACAG TGTCGCCGTT CTCTACCAGA GAAAAATCAT TTTTGACGAT GAAACCGGAA AGCTTCATGA TTCGACACAT CCGTTCATAC AGTCAATTCT TTCCGACAAG ATACTCGAAC AATGA
|
Protein sequence | MIELQDITLR YGTREILDNV SLTIEDNKIK AVLGPSGVGK STILKLILGL IKPNCGKILI DGVDITQLKE SQLYPIRRKM GIVFQGNALF DSMSISENLG FFLRENLKLS EKETERRVAE QIAFAGLEGY EDSLPENLSG GMKKRVAIGR ALIFNPKMIL FDEPTAGLDP VSSKKILGLI SSLRNKSDLG AAIVTHIIDD VFQVADSVAV LYQRKIIFDD ETGKLHDSTH PFIQSILSDK ILEQ
|
| |