Gene Cphamn1_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1872 
Symbol 
ID6375563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2029075 
End bp2029809 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content46% 
IMG OID642684368 
ProductABC transporter-related protein 
Protein accessionYP_001960270 
Protein GI189500800 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00971328 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGAAC TGCAGGATAT AACCTTACGA TACGGCACAC GGGAAATACT CGACAATGTT 
TCCCTCACTA TCGAGGACAA CAAGATCAAG GCGGTTCTCG GCCCCAGCGG TGTAGGAAAA
AGCACCATTC TGAAACTCAT TCTCGGCCTC ATAAAACCGA ACTGCGGAAA AATACTGATT
GACGGCGTCG ATATCACGCA GCTGAAAGAG TCTCAGCTCT ACCCGATTCG ACGCAAGATG
GGCATCGTAT TTCAGGGAAA CGCGCTGTTC GACTCAATGA GCATCAGTGA AAACCTCGGA
TTTTTTTTAC GTGAAAACCT TAAATTATCT GAAAAAGAGA CTGAACGGAG AGTCGCTGAA
CAGATCGCCT TTGCAGGACT TGAAGGCTAT GAAGACTCTC TGCCTGAAAA CCTGAGCGGG
GGAATGAAAA AACGGGTCGC CATCGGCAGA GCGCTTATCT TCAATCCGAA AATGATTCTG
TTTGACGAAC CTACAGCAGG ACTGGATCCG GTCAGTTCAA AAAAAATCCT TGGACTGATC
AGCTCCCTGA GAAATAAAAG TGATCTCGGC GCAGCCATAG TCACCCATAT TATTGACGAC
GTTTTTCAGG TTGCCGACAG TGTCGCCGTT CTCTACCAGA GAAAAATCAT TTTTGACGAT
GAAACCGGAA AGCTTCATGA TTCGACACAT CCGTTCATAC AGTCAATTCT TTCCGACAAG
ATACTCGAAC AATGA
 
Protein sequence
MIELQDITLR YGTREILDNV SLTIEDNKIK AVLGPSGVGK STILKLILGL IKPNCGKILI 
DGVDITQLKE SQLYPIRRKM GIVFQGNALF DSMSISENLG FFLRENLKLS EKETERRVAE
QIAFAGLEGY EDSLPENLSG GMKKRVAIGR ALIFNPKMIL FDEPTAGLDP VSSKKILGLI
SSLRNKSDLG AAIVTHIIDD VFQVADSVAV LYQRKIIFDD ETGKLHDSTH PFIQSILSDK
ILEQ