Gene Cphamn1_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1726 
Symbol 
ID6375413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1870781 
End bp1871338 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content50% 
IMG OID642684219 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_001960125 
Protein GI189500655 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA AAGTCCTCTA CATCGACGTA GAAACAACCG GCACCAACCC GGCGAAACAC 
GGGATCATCC AGATAGGGGC TATCATGGAG GTTTCCGGTA TCATCGCAGA AGAGCTGAAT
CTCAAATGCG CCCCTCACAG TGGCGCTGAC ATTGACGATC ACGCGCTGAC AATAACAGGC
ACAAGCAGGG AGGAACTGAC TCACAGAATG AGCAGCAAGG AAGCACTGCT TCAGTTCAAA
CAGTTTCTCA ACCGTTACGT CGAACAGTAT GACCGCGAAG ACAAATGTTA TCCTGCCGGA
TACAATGTGC ACTTTGACCT TGACTTCATA CAGCAGTGGT TCAAAATGCA CGGCGACAAA
TACGGAATAG GATCGTACGT GAACTGGAGA AGGCTTGACC CCCTTCCCGT CCTGTTTATG
AAAGATTTCA CCGGAGCCCT GCATCTGCCT GACTACAAGC TCGAAACAGT CTGTCGTCAC
TATGGCATCA GGCTTGAGGC CCATGACGCG TTCTCCGATA TTCGAGCGAC AAGAGAACTG
CTGACAAAAC TGCTCTAA
 
Protein sequence
MSKKVLYIDV ETTGTNPAKH GIIQIGAIME VSGIIAEELN LKCAPHSGAD IDDHALTITG 
TSREELTHRM SSKEALLQFK QFLNRYVEQY DREDKCYPAG YNVHFDLDFI QQWFKMHGDK
YGIGSYVNWR RLDPLPVLFM KDFTGALHLP DYKLETVCRH YGIRLEAHDA FSDIRATREL
LTKLL