Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1726 |
Symbol | |
ID | 6375413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1870781 |
End bp | 1871338 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684219 |
Product | Exonuclease RNase T and DNA polymerase III |
Protein accession | YP_001960125 |
Protein GI | 189500655 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA AAGTCCTCTA CATCGACGTA GAAACAACCG GCACCAACCC GGCGAAACAC GGGATCATCC AGATAGGGGC TATCATGGAG GTTTCCGGTA TCATCGCAGA AGAGCTGAAT CTCAAATGCG CCCCTCACAG TGGCGCTGAC ATTGACGATC ACGCGCTGAC AATAACAGGC ACAAGCAGGG AGGAACTGAC TCACAGAATG AGCAGCAAGG AAGCACTGCT TCAGTTCAAA CAGTTTCTCA ACCGTTACGT CGAACAGTAT GACCGCGAAG ACAAATGTTA TCCTGCCGGA TACAATGTGC ACTTTGACCT TGACTTCATA CAGCAGTGGT TCAAAATGCA CGGCGACAAA TACGGAATAG GATCGTACGT GAACTGGAGA AGGCTTGACC CCCTTCCCGT CCTGTTTATG AAAGATTTCA CCGGAGCCCT GCATCTGCCT GACTACAAGC TCGAAACAGT CTGTCGTCAC TATGGCATCA GGCTTGAGGC CCATGACGCG TTCTCCGATA TTCGAGCGAC AAGAGAACTG CTGACAAAAC TGCTCTAA
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Protein sequence | MSKKVLYIDV ETTGTNPAKH GIIQIGAIME VSGIIAEELN LKCAPHSGAD IDDHALTITG TSREELTHRM SSKEALLQFK QFLNRYVEQY DREDKCYPAG YNVHFDLDFI QQWFKMHGDK YGIGSYVNWR RLDPLPVLFM KDFTGALHLP DYKLETVCRH YGIRLEAHDA FSDIRATREL LTKLL
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