| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1636 |
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| Symbol | |
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| ID | 6375321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1768093 |
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| End bp | 1769256 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642684130 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001960037 |
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| Protein GI | 189500567 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.422542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAA TCCGCCATAT TATGTCGAAA ATCAAGCCAT ATCTTATTGC TCTGATTATT
GTTATTGCCG GTATCGTTAT CGGCAGATTG CTCAGCTCCG GTAACTCCCG TCAGCAGGAA
AAAGTCGTTC CGAAAAAGGA GAGTCAGGTG CCTGTTACTG AAATAACCAA TGGTCGGGTA
CAAAGGATAA TCAGGATGAA CGGTAAAGTA GAGGCAGTGA AAAAAATCGA GATATATGCG
GAAGTGAGTG GTGTTTTTGT CGACGGGGCA AAGCCGTTCA GGGAGGGGCG GAGGTTTGCT
AAAGGGGAGG TGCTGCTGAG AATAGATGAC AGCGTATACC GAAATACCGT TCTGGCTGAA
AAAAGTGCAT TACTCAATGA ACTGACATTG CTCATGCCTG ACCTTCTGAT TGATTTCCCT
GACTATGCAG AGCCATGGAA AAAGTATCTC GATGATTTCA GTATACTGAG ACCACTTCAT
TCTCTGCCTC CTGCCCAGAA TGACAGGTTG AGAAATTACG TGGCAGCCAG GAACATCTAC
GGCAAGTTTT TCTCGGTTCG CAGTATGGAA GAGACGCTGG CCAAGTACCG TATTCTTGCA
CCGTTCGATG GTGTCGTTAC TGTTTCCGAG GCAAATCCCG GCATTCTTGT TCGTAATGGG
CAAAAGATAG GGGAATTTGC GGCTGCGACC TCATATGAAC TGGAACTGTC TGCCCCTGTA
CGGGAGGCGG CATTTATTCG GGAGGGCGAC CGGATTACGC TTTTATCCGA TGATTTCAAC
GGCTCGATAG AGGCAAAGAT TGCGCGGGTG AACGATGCTA TAGATCCAGA CACCCAGACT
GTGGGCGTTT ATGTTCTTCT CGACGATCCT CGTTTGAAAG ACGGCATGTT CCTCTCGGCG
TCCCTGAGTG TCCCTGTGGA TGATGCGTCA CTGATTGCCC GTGAGTTGCT TGACTCGGAA
AACCGTGTAT TTGCGCTCCG TGATTCTGTT GTGATACTGC TTCCGGTGGA AGTTGTTTCG
GTTGGCGGAA AAACTGCGGT TGTGCGGGGT ATTCCGGATG GTACGGCAAT CGTTGCCGAG
CCTGTGGAGG GGCTTTTCAA CGGTATGGTG GTCTCTGAAT CGATAGTCAC GATGCAGGAG
CAGAGCACGA CCGATTCGGA GTGA
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| Protein sequence | MKQIRHIMSK IKPYLIALII VIAGIVIGRL LSSGNSRQQE KVVPKKESQV PVTEITNGRV
QRIIRMNGKV EAVKKIEIYA EVSGVFVDGA KPFREGRRFA KGEVLLRIDD SVYRNTVLAE
KSALLNELTL LMPDLLIDFP DYAEPWKKYL DDFSILRPLH SLPPAQNDRL RNYVAARNIY
GKFFSVRSME ETLAKYRILA PFDGVVTVSE ANPGILVRNG QKIGEFAAAT SYELELSAPV
REAAFIREGD RITLLSDDFN GSIEAKIARV NDAIDPDTQT VGVYVLLDDP RLKDGMFLSA
SLSVPVDDAS LIARELLDSE NRVFALRDSV VILLPVEVVS VGGKTAVVRG IPDGTAIVAE
PVEGLFNGMV VSESIVTMQE QSTTDSE
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