Gene Cphamn1_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1604 
Symbol 
ID6375282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1730824 
End bp1732026 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content50% 
IMG OID642684092 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_001960006 
Protein GI189500536 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAGT TGGGAAAGGC GGAACATACA TCGATCAGGG TTACCCCGCA GGGCGAAAAC 
AGGGTTATTG TAGAAAAAGA CCTGTCGAGT GAGGAAATGA TCCTGAATAT GGGACCCCAG
CACCCTTCAA CACATGGTGT GCTCAGGCTT GAATGCAAGA CGGATGGCGA GGTTGTTATC
GAGGCTGAAC CGTATCTCGG TTACCTTCAT CGCTGTTTTG AAAAGCATGC TGAAATGGTT
GACTATCCGG GCATCGTGCC TTTCGTGGAC AGAATGGACT ATCTTGCTTC CATGAACAAC
GATTTCGCCT ACTGTATCGC CGTGGAAAAG TTGCTTGATA TCGAGATTCC GAGGCGTGTC
GAGTTCATGC GTGTCATTGT CTCCGAGATA AACCGAATCG CTTCTCATCT TGTGGCGATT
GGTACCTATG CTATTGATCT TGGAGCGTTT ACACCCTTTC TTTTCTGTTT CCGTGATCGG
GAACACATGC TGAACCTTCT TGAGTGGACC TCCGGAGCGA GGATGTTGTA CAACTACATT
CTGATTGGTG GGGTTGCTTA TGATTTCCCG AAGGACTTTG CCCGTCGAAC CCTGGAATTT
GTGAAATATT TCAGGCCGAA AGCGCTTGAG TTACAAAAGC TTCTTACAGA GAACGAGATT
TTCGTAAAAC GTACGAAAGG TGTCGGGATG ATGCCTGCCG ATGTCGCTAT CAATTACGGG
TGGTCCGGAC CGATGCTTCG CGGATCCGGT GTCGAGTGGG ATCTCAGAAG GGTTGACGGA
TATTCTGTTT ATCCTGAACT TGATTTCAAG GTCTGTGTCC CTGATGGAAA ATTCTCTGAT
ATCGGCGACA GCCTCTCCCG CCATGTTGTG CGGGCGCTTG AGATTGAGGA AAGCCTCAAC
ATAATTGAGC AGTGTCTGGA CAAGATGCCT GAAGAAGAGG GCTTCGATCC AAGGTCGGCT
ATTCCGAAAA GGATCAGGCC GAAGGCAGGC GAGGTATACG GTCGGGCTGA GAACCCTCGT
GGTGAGCTTG GCTTTTATAT CATCAGCGAC GGGAAATCAA CCAAACCTCT CCGATGCAAG
GCCCGGTCAT CATGTTTCGT GAACCTGTCA GCCATGAAAG AGCTCTCTCT CGGACAGCTT
ATCCCTGACC TCGTTGCAAT TATAGGCAGC ATCGATATCG TTCTCGGGGA GGTTGACCGA
TGA
 
Protein sequence
MQELGKAEHT SIRVTPQGEN RVIVEKDLSS EEMILNMGPQ HPSTHGVLRL ECKTDGEVVI 
EAEPYLGYLH RCFEKHAEMV DYPGIVPFVD RMDYLASMNN DFAYCIAVEK LLDIEIPRRV
EFMRVIVSEI NRIASHLVAI GTYAIDLGAF TPFLFCFRDR EHMLNLLEWT SGARMLYNYI
LIGGVAYDFP KDFARRTLEF VKYFRPKALE LQKLLTENEI FVKRTKGVGM MPADVAINYG
WSGPMLRGSG VEWDLRRVDG YSVYPELDFK VCVPDGKFSD IGDSLSRHVV RALEIEESLN
IIEQCLDKMP EEEGFDPRSA IPKRIRPKAG EVYGRAENPR GELGFYIISD GKSTKPLRCK
ARSSCFVNLS AMKELSLGQL IPDLVAIIGS IDIVLGEVDR