Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1520 |
Symbol | |
ID | 6375198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1643058 |
End bp | 1643429 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642684013 |
Product | hypothetical protein |
Protein accession | YP_001959927 |
Protein GI | 189500457 |
COG category | [S] Function unknown |
COG ID | [COG4276] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00079382 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATGA GAATACTGAA CAAGGAAGAT GTTGGTTCTT TATATCCCGG AATGACAATC AGTTACAAGC TGTATCCTTT TTTTGATTTT CCTGTGAGAT GGTCAACGGA AATACAGACT GTTGACAGGC CTCATGAATT TTCCGATGAG CAGAAGAGTG GGCCGTATGA GTTCTGGCGA CACAGGCACC TTTTCAGTGA ACTTCCGGAT GGAGTTGAAA TGACCGATAT CATCGAGTAT ACAATTCCTT TCGGTTTCTT TGGCGAGATG CTGGATAAGC TGCTTATCCA CAGTCGGCTT GATTACGTTT TCAGCTATCG CCGTAAGAAA ATAGAGGAGA TTTTCGGGTT TGTTCAACGC GTAGCATCGT AA
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Protein sequence | MHMRILNKED VGSLYPGMTI SYKLYPFFDF PVRWSTEIQT VDRPHEFSDE QKSGPYEFWR HRHLFSELPD GVEMTDIIEY TIPFGFFGEM LDKLLIHSRL DYVFSYRRKK IEEIFGFVQR VAS
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