Gene Cphamn1_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1520 
Symbol 
ID6375198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1643058 
End bp1643429 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content43% 
IMG OID642684013 
Producthypothetical protein 
Protein accessionYP_001959927 
Protein GI189500457 
COG category[S] Function unknown 
COG ID[COG4276] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00079382 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATGA GAATACTGAA CAAGGAAGAT GTTGGTTCTT TATATCCCGG AATGACAATC 
AGTTACAAGC TGTATCCTTT TTTTGATTTT CCTGTGAGAT GGTCAACGGA AATACAGACT
GTTGACAGGC CTCATGAATT TTCCGATGAG CAGAAGAGTG GGCCGTATGA GTTCTGGCGA
CACAGGCACC TTTTCAGTGA ACTTCCGGAT GGAGTTGAAA TGACCGATAT CATCGAGTAT
ACAATTCCTT TCGGTTTCTT TGGCGAGATG CTGGATAAGC TGCTTATCCA CAGTCGGCTT
GATTACGTTT TCAGCTATCG CCGTAAGAAA ATAGAGGAGA TTTTCGGGTT TGTTCAACGC
GTAGCATCGT AA
 
Protein sequence
MHMRILNKED VGSLYPGMTI SYKLYPFFDF PVRWSTEIQT VDRPHEFSDE QKSGPYEFWR 
HRHLFSELPD GVEMTDIIEY TIPFGFFGEM LDKLLIHSRL DYVFSYRRKK IEEIFGFVQR
VAS