Gene Cphamn1_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1482 
Symbol 
ID6375160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1605317 
End bp1605787 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content47% 
IMG OID642683975 
Productnuclear protein SET 
Protein accessionYP_001959889 
Protein GI189500419 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCT GTACTTTTGT ATTCTATACC ATCCTTTTCG TCTCAGGAAT GACGGCGGGT 
ATTTTGCTCA GCAGAACCTT TCAGAAAAAT TCAGCCAATA GCTCACTTCC GGCTGTTCGG
GTAGGCAAAT CAAATGTCAG TGGACGAGGG GTTTTCGCGT TAAAGAACAT TCAAAACGGT
GCCATTATTG AACGCTGTCC GGTGCTTGAA GTGGACGAAC AGGATATAGG CGGTGAACTG
CTCAACTATG TTTTCTACGG AGATAACGAA AAAGAGAGAC TGGTGGCCAT GGGAAACGGG
ATGCTGTTTA ACCACTCATC CGTTCCAAAT GTCGCCTACT ATCTTGAAGA AACACCGCTC
GGGCCTGAAC TGGTAATTTA CGCCTTGAGA GATCTGCGAA AAGGCGAAGA GCTGTTCTAT
ACCTACGGGG ATGACTGGTG GACAACAAGG AACATCCCTG AGATCTCCTG A
 
Protein sequence
MEPCTFVFYT ILFVSGMTAG ILLSRTFQKN SANSSLPAVR VGKSNVSGRG VFALKNIQNG 
AIIERCPVLE VDEQDIGGEL LNYVFYGDNE KERLVAMGNG MLFNHSSVPN VAYYLEETPL
GPELVIYALR DLRKGEELFY TYGDDWWTTR NIPEIS