Gene Cphamn1_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1476 
Symbol 
ID6375154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1597237 
End bp1598478 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content53% 
IMG OID642683969 
ProductHI0933 family protein 
Protein accessionYP_001959883 
Protein GI189500413 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCGG CCTTCGCGGC AAGAAAAATG GCACGCAGTC AGGGAATCGG GGACGAGCAG 
TTCGTTATCA CGATACTGGA AAGGAATTCT TCTGTCGGCG CGAAGATTCG TATTTCAGGC
GGAGGCAGGT GTAATATCAC TCATGCAGGT ACGGTTAAAG ATCTTTTGCG GAAAGGGTTT
CAGCGTAAGG TTGAGCAGCG GTTTCTTCGT CATGCCCTCC ATGCATTTTC CAATGAGGAT
GTTCGCGCGA TGCTCGCTAC ATGCGGAGTT GAAACAGCAG CTCGTGACGA TGGAAAAGTA
TTTCCTGTTT CCCGAAATGC ACGCGACGTG CTCGAAGCGT TTCAGTCGAT GCTCCTGAAT
GCCGGGGTTC ATCTGGTTGC CGGGGAGAGA GTGACCCGGG CAGAGAGGCT GGAAGAGGGA
TTCAGGGTTG CTTCTGAAGG CAGGGAGCAT ACCTGTCGCT TTCTTGTTCT TGCAACTGGC
GGTGTTTCCT ATCGACAGAC AGGTACAACA GGTGATGGAC TGGATATCGC GATCTCGTTG
GGACATAGTG TGGTGAAACC ATCACCCGCC CTTGCTCCGA TCTATCTGAA ACCTCCTCCT
CCGCCGGAGC TTGTGGGGGT TTCCCTGAGA GGCACAGGTT TACGGGTGCA GTGCTCTGGA
ACTGTGGTTT CGAGGAATGG AGATGTTCTG ATTACGCATA AGGGCGTATC CGGCCCTGCA
TGTCTGTCGC TTTCAGTCGA TGCCGCCCTG TTGCTCAATA GTCATGGAAA GGGGGAACTG
ACGCTTGATT TTTTCCCTGA TCATTCATCT GAAGAAGTTG CAGTCCTGCT TCTGCGGCAT
GGTGAAGCAC ATGGTTCGCA GTTTATTCGT AAATATCTTC AGGCGCAGCA GGCCATACCC
TCCGCGATGG TGCCGTATGT CATGCTTCAG GCGGGTATCG ACCGCCAGGA GAAGTGGGGG
AGTCTTACAA AAAAAGCCCG CCGGTCGCTT CAGCGTACCT TGAAAGATTT CTCGTTAGGC
TGGCTGAAGT CAATTCCTCT TGATGCCGGA GAGGTTTCGG CGGGCGGAGT CGCGTTACAG
GAGATTCATC CCGGTACCAT GGAATCAAGA GTGTGCAGCG ATCTGTTTCT CTGCGGAGAA
CTGCTTGATT ACACCGGGGA GGTCGGCGGT TTCAACCTGC AGGCCGCTTT CTCAACGGGA
TGGCTTGCAG GTTCATCAAT TCGTTACCCG GTACAGGCAT AA
 
Protein sequence
MCAAFAARKM ARSQGIGDEQ FVITILERNS SVGAKIRISG GGRCNITHAG TVKDLLRKGF 
QRKVEQRFLR HALHAFSNED VRAMLATCGV ETAARDDGKV FPVSRNARDV LEAFQSMLLN
AGVHLVAGER VTRAERLEEG FRVASEGREH TCRFLVLATG GVSYRQTGTT GDGLDIAISL
GHSVVKPSPA LAPIYLKPPP PPELVGVSLR GTGLRVQCSG TVVSRNGDVL ITHKGVSGPA
CLSLSVDAAL LLNSHGKGEL TLDFFPDHSS EEVAVLLLRH GEAHGSQFIR KYLQAQQAIP
SAMVPYVMLQ AGIDRQEKWG SLTKKARRSL QRTLKDFSLG WLKSIPLDAG EVSAGGVALQ
EIHPGTMESR VCSDLFLCGE LLDYTGEVGG FNLQAAFSTG WLAGSSIRYP VQA