| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1440 |
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| Symbol | |
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| ID | 6375118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1563403 |
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| End bp | 1564851 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642683934 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001959848 |
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| Protein GI | 189500378 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.830934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGATA TTAAGCTACG GCAGAGTCAG CGACAACAGC TCTCTTCCCA GCAGATTATT
ACAAGTCAGC TGCTTCAGCT TCCGTTATTG CATCTTGAAC AGCGGATCTA TGATGAGCTG
CAGGAAAATC CCATGCTCGA ACTTGAAGAA GAGAAGACTG ACAGTGTTGA CGATTCAGCT
GGAAATGACG ACGACGGGGA AGAGGACCTG TTCGGTTCAG TTGATCGGTT TGAGGCTGAA
ACGACAGGTA TGACGGATAA GGCTGAGAGA AAAAAGGACG ACGCTGAAGG GGTGATGCAG
TTCACCATTG ATAATCGTCC GAAAGAGAAC TTTTTTCAGG CAGTGCACCA TGATTCCTTC
GAGGAAAAGC TGCTGAAAGA TTTTTCCCTG CAAGGCAACG TAAGTCCGGG TGAACTGCTG
ATTGCATCTG AAATTCTCGG AAATCTGGAT GAAGACGGCT ATTTGAAGGA TGATCTCTCT
GTTATTGTTG ACGGTCTTGC GCGTAACGGG ATAGCGGTTA CTGAAAAAGA GGTGCAGAGC
GTGATTAAAA AAATCAACGT GCTCGAGCCT CCAGGAATTG CCGTTCACGG TCTTCGGGAA
AGACTGCTCA TTCAGATAGA ATACAAGGGA ACTCGTAACC GAACAGCTTC CGAGTCTATT
GCAGTAGGGA TTCTCAAGGA TCATTACGAG GATATGCTCA ACAACCGATA CGAGCGTATT
CTCAAGAAGA TGCAGATCAC CCTGATTGAG CTGGAGTCGG CTATTGCAGT CATCACGAAA
CTTGATCCGC ATCCTTTCGC GTCCGGTGTG AGCAGCGCCG AGTACATTGT TCCCGACTTT
ATCGTCACCT ATGAAGACGG ACGCCTTACA GCGGTTCTGA ATGACCGGAG CAATATGACT
GTTCATGTTT CAAGAGCGTA TCAGGAGGTG GTAAGGAATA AGTCAGTTGC TTCAGATGAC
AGGAAGTACA TGCGGCAGAA ACTCAATCGG GCAAAAGAGT TTGCCAGTGC TATTGCCATG
CGCAGGAATA CCCTTATAAA AGTCATTGAG GCACTGATGA ATTTTCAGTA TGACTTTTTT
GTTTCCGGTC CTGATAAGCT TCGGCCTCTT ATCATGAAAG AGATAGCTGA AAAAACGGGA
TTTGATCTTT CTACAATAAG CAGAGCGGTC AACGGAAAAT ACGTCCAGAC CCGATTTGGT
ACTTTCGAAC TTAAATACTT TTTCAGCGGG AGTCTCCCTA CGGAAGATGG CGAAGATCTC
TCAACCAAGA TCATCAAGCA GTATATACGG GAGATGATAC AAACCGAAGA TGCGACCAGA
CCGGTAAACG ATGATCTGCT TACAAAAATG CTGGATGAAA AAGGAATCAG GATTGCCCGG
AGAACGGTTG CAAAATATCG CGAACAAATG CAAATTCCAG TAGCAAGATT AAGAAAGAAA
ATATTTTAA
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| Protein sequence | MPDIKLRQSQ RQQLSSQQII TSQLLQLPLL HLEQRIYDEL QENPMLELEE EKTDSVDDSA
GNDDDGEEDL FGSVDRFEAE TTGMTDKAER KKDDAEGVMQ FTIDNRPKEN FFQAVHHDSF
EEKLLKDFSL QGNVSPGELL IASEILGNLD EDGYLKDDLS VIVDGLARNG IAVTEKEVQS
VIKKINVLEP PGIAVHGLRE RLLIQIEYKG TRNRTASESI AVGILKDHYE DMLNNRYERI
LKKMQITLIE LESAIAVITK LDPHPFASGV SSAEYIVPDF IVTYEDGRLT AVLNDRSNMT
VHVSRAYQEV VRNKSVASDD RKYMRQKLNR AKEFASAIAM RRNTLIKVIE ALMNFQYDFF
VSGPDKLRPL IMKEIAEKTG FDLSTISRAV NGKYVQTRFG TFELKYFFSG SLPTEDGEDL
STKIIKQYIR EMIQTEDATR PVNDDLLTKM LDEKGIRIAR RTVAKYREQM QIPVARLRKK
IF
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