| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1415 |
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| Symbol | |
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| ID | 6375093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1534573 |
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| End bp | 1538220 |
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| Gene Length | 3648 bp |
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| Protein Length | 1215 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642683910 |
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| Product | helicase domain protein |
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| Protein accession | YP_001959824 |
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| Protein GI | 189500354 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.17865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACG AGAGGGCAGC ATTGATAACC TGGATGCGCG GTGAGATTGT CGGGCCGTCA
AAACCGGTAA GGGAACCAGT AACCGTAACG TTCGAGAATA ATGTTCTCAT TGATAACGGT
CAATGTGTCA GAGGCCCGAA GGTATGGCAA CCTGAACCCG GATCAAAATT GGAGGAAGTA
CTTCTGATGA AGGGTGACGC CCCTCACCAG AAATATGGGG TGGGATTGCT TCATCCTGAT
GGTCATCCTT CAGAGGAGCA GGTTGATGAG GTGAGCAATG GAATTTCTGG TGATGACGTG
CTACCGGAAG AAGATTTTAC AGTACCTGAG AGTATGGAAA ATACCTCAAC AGACTATCAG
GGGACGGAAC AGGTTGATGC TGATGATTTT GAGGTATCGA GTACTGATGT ACGCTATCCA
AGCACGATCG GGATCACAAT AAACATTAAG ATTGATCCTC AAGGGGAGAT AGTTATACAT
TTTCCGCAAG AGAAAAGATT TTTCTGGCAG CTTGGCAATG ACCGGCCATT TCCTGTTAAC
GGTCGTTACG AGCAATGTAT CCACCGGGTT CCGGATGGAA AGGAAAATCC TTCTGTCTGG
CGACGCTATC CCTGCTTCAA TCCTGATACT AAAATCACTG TTTCTGCATA TGAATTACAA
AACAGACAAG TAATCAGTAG GGATATCGAA TTGCCGGAAG GTTCCCCAGG CAATATGCAC
CTGGTTTTAA AGGTCTATCC CCGACGGATT TCGGAACAGG ATGATTGCTG GCTCCTTACA
GTCGTTTTGC AAAACACCTC TGGATCTGGA TTACAGCCTC AGCATTATGC AGCAACTTTG
TATCAGGCTT TTTTCGAGGT GACGGTCAGG GCTGGCTGTT TCGTGGCTTA TCCAGAAAGC
AGTCGGGGAT TTTCTGAACT GGATGAAGAT GAACAATCAC TCGCATTGCT TTACCGTGAC
TCTTCTACAT GGGCCATCGG TCATGGGTGT GCAGCGGGCT GGGATGCGGA ACTAGGCAAT
AGTCCTTCCT GTGTTTATGC CGATGTCATG CCTGCGGTTG AACTTCCTAG CATGACACCT
GATATTGTAG ACGTTGATGG TAACATGATT CAGCTGTCCA TGCGTCAGCT GTCATCATTT
ACACCAGATT TTAATGAAGC CGACATATTG CTCCGTCTTG CTGAAGAATA TTATAAATGG
ATTGAAAAAC AGCGTGACGC TTTGGAGTAT CTTGAGAATA ACGACCTGAA AATTGTTGCT
AAACGACATA TTGAGCAATC TATGGTTTGC CTGGGAAGAA TAAGAAAAGG AATTGAGCTT
CTTGAAAGTA ATACAAATGC CCTTAACGCT TTCAGACTTG CCAACCTTGC GATGCTTCTT
CAGCAAATAG CAGCCAAAAA GCTGAAACGT CGACCTCTGA TATATGATCG TCAGATGGAA
AGGGTTAGAC CACAAGGAGA AATGCAAAGT CCATGGCTCA TATACAAAAA CAATAACGAA
GGTGGACAAA TAGGTCAATG GAGGGCATTC CAGCTTGCGT TTTTGCTGAT GTCGATTGAG
GGAGTAATTG ATGGTAAATC TCCAGACAGG GATACGGTTG ATCTGATATG GTTTCCTACA
GGAGGAGGCA AAACCGAAGC GTATCTTGCA GTTGTATCAT TTTACATTTT TTACAATCGT
TTGCAAATGG CTGATGGTGG CGATGAAGAA CACCGACTGG ATGGCACCAA CGTCTTGATG
CGTTATACCC TGAGGATGCT TACAGCGCAG CAGTTTCAGA GGGCGGCAAG TCTGATTGCA
GCCATGGAGT TTCTAAGAAG GCTGAATGGA GCGGAAAATT TGCCTTCAAT CCCCGGAAAA
CGTTTTTCCA TTGGATTGTG GGTGGGAAAG GACGCTACGC CAAATAAAAT CAGTGATGCT
GCTAATAAGC TTGTTGAGTT TCGCAAACAG CGGAACGGTC ATACAGGAAA CCCGTTTGTG
CTCACTGAAT GTCCATGGTG CAGATCGGAA ATCGGGCGTT TTCACAATGA GCTTCCACGA
CGCATCAGTA AGCAAGAAAG AGTCAAGGGT ATCAATAGCT CAAAAGATGA AGGTCCACGA
CTTCTTTGTC CGGATTCATG TTGTGAGTTT GGACAGATGG CAGTCGATAC ATGGCTTCCG
ATTGAAGTTA TTGATCAGCG CATTTACCAG ACAAGACCTT CACTTGTCAT CGGAACTGCA
GACAAGTTTG CGATGATTGC ATACCAACCT GATGCAGGGG CGCTTTTTGG AAGAAGCAGG
GAGGATGGTG TTGTACGGCA AACGTACTCT CCTCCTGGAA TGATTATTCA GGATGAGTTA
CATCTGATAT CAGGACCATT GGGTACAATG TATGCAATGT ATGAAAGCGT TTTCGAGAAA
CTCTGCACAG TATCTGCCAA CGGGGTTTCT GTCAAACCCA AAATCATTTC TTCGACTGCC
ACCATACGGG GAGCAAAGGA TCAGGTGAAA GCCGTTTTCG CAAGAGACAG TTTGAGCCTT
TTCCCTAGTC CTGGTTGGAC TATGGGCGAT TCCTTTTTCG GCACCTATGC CAGGGATGAA
AATAACCGGC TCAGGAGCGG ACGCTTGTAT CTTGGTATTC ATGCCAACGA ATTCAATATT
CTCACAGCTG AAAACAGGGT TTTCGCCTCC GCTCTTTTCA GGAGCTTTTT TATCGAGTCC
GAAAAGCGTG ATCCATGGTG GACTTTATTG GTGTTTTTTA ACAGTATCCG CGAACTTGGC
GGTGCCCGTA CGTTGTTTGA TTCCGATATC AGGGACAGGA TGAAATTTCT CTTCAGCAGG
GAGGGCCAGG GACAAGAACG AAGATATATC GGCAATCCTG AAGAATTGAC CGGAAGGATT
GACAATGCTG CTATTGTTTC CATGATGGAC AGGCTTTCAA AAAAATATAA TGAAAGCGCA
AGAGCGATTG TTGACGTATG CCTTGCATCG AATATCATCG AGGTCGGTGT TGATATCGAC
AGGTTATCTT TGATGGGTGT GGTCGGTCAA CCGAAAACAA CAGCCCAGTA CATTCAGGTT
ACCGGCCGTG TCGGACGCAG ATGGGCCGAG AGTCCGGGGC TTGTCCTGAT GCTCTACAAT
CCGGCGAAAA GTCGTGATCG TTCTCATTAT GAGCATTTTC ACAGTTATCA TAAACGCCTG
TATGAACAGG TTGAACCGAC GTCGGCAACA CCGTTTTCTG GATCTGCCAT TACCCGCGCA
TTGCCCGGGA TCTTAATCAG CTGGGTTCGG CAGAATATTG ATGCTGAAAA TCCTGTTGAT
TTCGAGCGTT TCTGTGAAGC ACTTCAAGAA GTATACGGAT TCGTGGAAGA AAGATGTAAA
TCATTGCTTG ATGGTAACGA TGAGGAACTA GCAAGAGCCT TATCCAAACT AAGTCAGGTC
AGGGATGAGT TGATACAGAA GTGGAACGCC AATCCTCAGA CATGGCAAGA ATACCCGCAT
CGTATAGGAG GCGAGTATCT GATGTTATGG CCTGGACAGT ACAGGACTGT GGCGCAGAAT
AATAAAGGGG TCGATGTGGC ATCGAGCATG CGAAGTGTTG ATGCTATGGC CGGTCTCGGA
ATTTCGTCTG CATACTTTGA TGCAGAAATA AACCAACAGG ATGGCTGA
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| Protein sequence | MNDERAALIT WMRGEIVGPS KPVREPVTVT FENNVLIDNG QCVRGPKVWQ PEPGSKLEEV
LLMKGDAPHQ KYGVGLLHPD GHPSEEQVDE VSNGISGDDV LPEEDFTVPE SMENTSTDYQ
GTEQVDADDF EVSSTDVRYP STIGITINIK IDPQGEIVIH FPQEKRFFWQ LGNDRPFPVN
GRYEQCIHRV PDGKENPSVW RRYPCFNPDT KITVSAYELQ NRQVISRDIE LPEGSPGNMH
LVLKVYPRRI SEQDDCWLLT VVLQNTSGSG LQPQHYAATL YQAFFEVTVR AGCFVAYPES
SRGFSELDED EQSLALLYRD SSTWAIGHGC AAGWDAELGN SPSCVYADVM PAVELPSMTP
DIVDVDGNMI QLSMRQLSSF TPDFNEADIL LRLAEEYYKW IEKQRDALEY LENNDLKIVA
KRHIEQSMVC LGRIRKGIEL LESNTNALNA FRLANLAMLL QQIAAKKLKR RPLIYDRQME
RVRPQGEMQS PWLIYKNNNE GGQIGQWRAF QLAFLLMSIE GVIDGKSPDR DTVDLIWFPT
GGGKTEAYLA VVSFYIFYNR LQMADGGDEE HRLDGTNVLM RYTLRMLTAQ QFQRAASLIA
AMEFLRRLNG AENLPSIPGK RFSIGLWVGK DATPNKISDA ANKLVEFRKQ RNGHTGNPFV
LTECPWCRSE IGRFHNELPR RISKQERVKG INSSKDEGPR LLCPDSCCEF GQMAVDTWLP
IEVIDQRIYQ TRPSLVIGTA DKFAMIAYQP DAGALFGRSR EDGVVRQTYS PPGMIIQDEL
HLISGPLGTM YAMYESVFEK LCTVSANGVS VKPKIISSTA TIRGAKDQVK AVFARDSLSL
FPSPGWTMGD SFFGTYARDE NNRLRSGRLY LGIHANEFNI LTAENRVFAS ALFRSFFIES
EKRDPWWTLL VFFNSIRELG GARTLFDSDI RDRMKFLFSR EGQGQERRYI GNPEELTGRI
DNAAIVSMMD RLSKKYNESA RAIVDVCLAS NIIEVGVDID RLSLMGVVGQ PKTTAQYIQV
TGRVGRRWAE SPGLVLMLYN PAKSRDRSHY EHFHSYHKRL YEQVEPTSAT PFSGSAITRA
LPGILISWVR QNIDAENPVD FERFCEALQE VYGFVEERCK SLLDGNDEEL ARALSKLSQV
RDELIQKWNA NPQTWQEYPH RIGGEYLMLW PGQYRTVAQN NKGVDVASSM RSVDAMAGLG
ISSAYFDAEI NQQDG
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