Gene Cphamn1_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1370 
Symbol 
ID6375048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1484977 
End bp1485843 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content51% 
IMG OID642683866 
Productlipoyl synthase 
Protein accessionYP_001959780 
Protein GI189500310 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.224569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.472643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC AGAGAAAACC GGACTGGCTG AAGATGAGAC TTGCCGGAAC CGCGAATTTC 
GCTTCTACGA AGAAGCTGAT TGCCGGTTAC GGGCTCAATA CGGTCTGCCG TTCCGCCATG
TGCCCCAACC TCCACGAATG CTGGTCTTCC GGAACGGCTA CGTTTCTGCT GCTGGGCGAG
TCCTGTACAA GAACCTGCCG TTTCTGTGCT GTGACGTCTA CAGCACATCC ACCTTTCCCT
GATCCTGAAG AACCTTGGAA AATCGCCAGC GCTGTCCGTG GCATGCGGCT CGCTCATGTT
GTGTTAACAA GCGTCACGCG CGATGACCTT GCGGATGGAG GATCAAAAGC ATGGACGGCA
ACCATTGATG CGGTCAGGGC AGAAAATCCT GAAGTCTCAA TTGAGTGTCT CATCCCGGAT
TTACAGGGAG ATCATGACGC ACTGCACAGG ATTATGATCA TGAGTCCTGA TGTGCTCAAT
CATAATATTG AAACAGTTCC GTCGCTCTAT GGGGCTGTAA GACCGGAAGC TGATTATATT
CGGTCCCTTG AAGTGCTTCG TTTAGCACAA CAGGAGTACT CCCTTCAGAC AAAATCAGGA
CTGATGGTCG GAATGGGCGA AAAGGAACAG GAGGTTCGTC GTGTACTGGA TGATCTTGCT
CGTGTCGGGT GCAGGCATGT GACCATCGGT CAGTACCTGC AGCCATCCAG TAAACACTTC
CCTGTTCATT CCTACGTTAC TCCTGAGTGT TTCGACCGGT ACAGGATGTA TGCGCTTGAA
TCGGGATTCA GACATGTGCA GTCGGGGCCT TATGTCCGGA GCTCCTATCA CGCAGCGGAT
AGTTTAGTAA ATAAAAAATT AAATTAA
 
Protein sequence
MKIQRKPDWL KMRLAGTANF ASTKKLIAGY GLNTVCRSAM CPNLHECWSS GTATFLLLGE 
SCTRTCRFCA VTSTAHPPFP DPEEPWKIAS AVRGMRLAHV VLTSVTRDDL ADGGSKAWTA
TIDAVRAENP EVSIECLIPD LQGDHDALHR IMIMSPDVLN HNIETVPSLY GAVRPEADYI
RSLEVLRLAQ QEYSLQTKSG LMVGMGEKEQ EVRRVLDDLA RVGCRHVTIG QYLQPSSKHF
PVHSYVTPEC FDRYRMYALE SGFRHVQSGP YVRSSYHAAD SLVNKKLN