Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1370 |
Symbol | |
ID | 6375048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1484977 |
End bp | 1485843 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683866 |
Product | lipoyl synthase |
Protein accession | YP_001959780 |
Protein GI | 189500310 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.224569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.472643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTC AGAGAAAACC GGACTGGCTG AAGATGAGAC TTGCCGGAAC CGCGAATTTC GCTTCTACGA AGAAGCTGAT TGCCGGTTAC GGGCTCAATA CGGTCTGCCG TTCCGCCATG TGCCCCAACC TCCACGAATG CTGGTCTTCC GGAACGGCTA CGTTTCTGCT GCTGGGCGAG TCCTGTACAA GAACCTGCCG TTTCTGTGCT GTGACGTCTA CAGCACATCC ACCTTTCCCT GATCCTGAAG AACCTTGGAA AATCGCCAGC GCTGTCCGTG GCATGCGGCT CGCTCATGTT GTGTTAACAA GCGTCACGCG CGATGACCTT GCGGATGGAG GATCAAAAGC ATGGACGGCA ACCATTGATG CGGTCAGGGC AGAAAATCCT GAAGTCTCAA TTGAGTGTCT CATCCCGGAT TTACAGGGAG ATCATGACGC ACTGCACAGG ATTATGATCA TGAGTCCTGA TGTGCTCAAT CATAATATTG AAACAGTTCC GTCGCTCTAT GGGGCTGTAA GACCGGAAGC TGATTATATT CGGTCCCTTG AAGTGCTTCG TTTAGCACAA CAGGAGTACT CCCTTCAGAC AAAATCAGGA CTGATGGTCG GAATGGGCGA AAAGGAACAG GAGGTTCGTC GTGTACTGGA TGATCTTGCT CGTGTCGGGT GCAGGCATGT GACCATCGGT CAGTACCTGC AGCCATCCAG TAAACACTTC CCTGTTCATT CCTACGTTAC TCCTGAGTGT TTCGACCGGT ACAGGATGTA TGCGCTTGAA TCGGGATTCA GACATGTGCA GTCGGGGCCT TATGTCCGGA GCTCCTATCA CGCAGCGGAT AGTTTAGTAA ATAAAAAATT AAATTAA
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Protein sequence | MKIQRKPDWL KMRLAGTANF ASTKKLIAGY GLNTVCRSAM CPNLHECWSS GTATFLLLGE SCTRTCRFCA VTSTAHPPFP DPEEPWKIAS AVRGMRLAHV VLTSVTRDDL ADGGSKAWTA TIDAVRAENP EVSIECLIPD LQGDHDALHR IMIMSPDVLN HNIETVPSLY GAVRPEADYI RSLEVLRLAQ QEYSLQTKSG LMVGMGEKEQ EVRRVLDDLA RVGCRHVTIG QYLQPSSKHF PVHSYVTPEC FDRYRMYALE SGFRHVQSGP YVRSSYHAAD SLVNKKLN
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