| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1285 |
|---|
| Symbol | |
|---|
| ID | 6374962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1397800 |
|---|
| End bp | 1398270 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642683782 |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_001959697 |
|---|
| Protein GI | 189500227 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.770765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA TTGAAACACG ATTAAAGAAT GCAGGCATAC TGCTGCCTGA GACGCCCACT
CCTGCAGGTA TATATGTTCC CGCGCTGCGA TCAGGAGGGC TGGTTTATAC ATCCGGACAG
CTCCCGTTCG TTGACGGCAG CCTCCTTGAG CAGGGGGGCA GGGGCAAAGT TAACGAAATC
AATCAGGCTC AGGCAGCGAT TGCCGCACGT GTGGCGACCC TGAACGCTCT TGCGGCTGTA
AAAGGGGCGG TAGGCAGCCT TGACGCTGTT GAAAGGGTGC TGAAACTGAC GGTTTACGTC
GCCAGCGAAT CATTTTTTTC CAATCAGCAC ATCGTCGCCA ATGGAGCATC GGCGGTATTG
TATGAAGCGT TTGGTGAAAA TGGCAAGCAT GTAAGAAGTG CCATAGGGGT AGCAGAGCTT
CCTTTGGATG CCAGTGTGGA GCTTGAGCTT GTTGTCAGTT GTTCTGATTA A
|
|---|
| Protein sequence | MSEIETRLKN AGILLPETPT PAGIYVPALR SGGLVYTSGQ LPFVDGSLLE QGGRGKVNEI
NQAQAAIAAR VATLNALAAV KGAVGSLDAV ERVLKLTVYV ASESFFSNQH IVANGASAVL
YEAFGENGKH VRSAIGVAEL PLDASVELEL VVSCSD
|
|---|
| |