Gene Cphamn1_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1277 
Symbol 
ID6374954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1390529 
End bp1391233 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content50% 
IMG OID642683774 
Producthypothetical protein 
Protein accessionYP_001959689 
Protein GI189500219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00102442 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.493523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGG CGCCTCGGAA CCCGGTGGTG ATTCTGCCGG GAGTACTTTT CTGGGATCAA 
CTCTATACGG GGATGAAAAA AGCTCTCTCG GCCTATCTGC CTGAGAGCAT GATAGAAATT
GTCCCCATCA CCATTGTCGA CTGGACAGGA TTTCCTCCTT CTCCGGAGCG TTCGACCAAC
CGGGTGATGG CCGCGCTTGA CCGAACGCTC GCGGTAATGC AGAAGCGCTT TCCCGATGAA
AAAATCACCA TTGTGGCTCA TAGCGGGGGA GGCACAGTCG CTCTTGTCTA TCTTCTTGAG
CAGGAGTTTC AGGGAGATGT CTATCATCGC GGTTCCTCGG TGGGCAGGCT TGTCGCGTTG
GGGACTCCCT TTGAGACGAT CGAGCATTTC GCAAAGATTA AAACCGATTT TATCAACACG
CATCTCACTC CCGGTTTTTT CAACCGGTGC AGCGTTGTTT CGATAGTAAG CGATAAGTAC
ACCGGCGCAC TGGATAAAGG AATAGTAGAG CGTATGTGCT ATATGTTCTA CAAAAATGTG
TCAGGTCGGG GGAATATAGC CGGAGACGGC ATTGTACCGG TAAAAAGCTG CTTTTTGAAA
GGTGCTGAAA ATGTCACAAT TTCAGGAGTG GAGCATTTGC CGACGCCGCA TACCCGGTGG
TATGGTACAC AAGAAGGGAT AGAACAATGG ATAGGATGGA TGTAA
 
Protein sequence
MMQAPRNPVV ILPGVLFWDQ LYTGMKKALS AYLPESMIEI VPITIVDWTG FPPSPERSTN 
RVMAALDRTL AVMQKRFPDE KITIVAHSGG GTVALVYLLE QEFQGDVYHR GSSVGRLVAL
GTPFETIEHF AKIKTDFINT HLTPGFFNRC SVVSIVSDKY TGALDKGIVE RMCYMFYKNV
SGRGNIAGDG IVPVKSCFLK GAENVTISGV EHLPTPHTRW YGTQEGIEQW IGWM