| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1214 |
|---|
| Symbol | |
|---|
| ID | 6374891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1315437 |
|---|
| End bp | 1318223 |
|---|
| Gene Length | 2787 bp |
|---|
| Protein Length | 928 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642683712 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001959627 |
|---|
| Protein GI | 189500157 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGT TTCTCAAGTA TTTTCTTCTC ATCCTGGTTC TGGTCATGAC TTCCGGTTTT
ATTGTTTTGC AGGTACTGAA ACCTCGCCTG AACGGGTTTA TCAAGCAGGC TCTCAACAGT
GCAGTCGATG CGAATGTTGA TTATGGTGAC GCGGATATAT CGATTTTCCA GGCATTTCCT
GCCGTAAGTC TCTCCTGTAA AGATCTGCAG GTTCTCGACA AGAACGTATC TGGCATGGAC
ATACTGGCGA CCGCAGAGAA ATTTTCGGTC GCATTTGATC CGTTTTCGGT TTTTTCAGGA
GAACTGAAGA TTGCTTCATT GAGGGTGGAT CGCCCGATGA TACACATCCG GATTGACAGT
GCCGGTCGAA ACAATTGGGA TGTTTTTCCT CCCGCAGACC CGTCAAAAAG TTCGCAAGAA
CTCTCAGGGC TCAATCTCCT GTTTCGTGAT TTTAAGATAA AAGACGGATA TATAGTATTT
TACGATAGCA AGAAAAACAA CTCTTTTCTT GTCCAAGGGT TCAATTATGA GATGAAAGGA
CGACTGGGCG GACGCTCTTC AACCCTTCGG ACGAGCAGTG TCATGGACAG TCTCAGCGTG
ACTATTGGCG GCATGTCACT GCTTGACAAA ACACGAGCGT CATTTACAGC TGAAATTGCG
GCTGACCTCG AGAACAGGAA ATTTCAGCTC AAGGACAATC GACTGGCTCT CAATGAGATG
GGTATCGTTC TGGATGGTAC GGTTTCACTG CTTGATGACG CAGTGAATAC CGATCTTGAT
TTCAGGGCGG ACAACATCGA ATTGAAGGAG TTGCTTTCTC TTCTTCCGGT ACTCTATGAG
AACAACTACA AGAAACTCGA CGCCCGGGGA GGCGTGAGAT TCGCAGGCCA TGTAAAAGGG
CTTTACCGAA AAGAGCAATT GCCCGCCTTT GAGCTGGCGC TTGATGTCAG TGACGGCAGT
TTCGGTTATG AAGGTGTACC GGTAAGAGCT GAAGAGATCT CTTTCAGCAG CAGCGTGACA
AATCCCGGGG GTGACGCAGA TAAAACCTTG CTCTCTGTTC CTGAACTTAC TCTCAGAATT
AACGGCAAGC CGGTTGTGAT GAAGCTCGAT GTCAAAACAC CGGTTTCCGA TCCGTATATC
GATGCGGCAA TCAACGGTTC TCTGAATCTT TCTGATTTTC AGAAGATCTA TCCGGCAAAG
GATCTTCAGT TATCGGGTGA ATTGCGATCG AATGTTGTCG TGAAAGGAAA TCTTTCAGCT
TTCAACGCCG GAGTAACCGG CCTGAAGAGA ACGGAAGCCT ATGGCTCGAT CATGGCGAAA
GGAGTGAAAA TATCCTCTGA AAAATTTACG CCCGATATAG CGATATCATC CGCTCAGCTT
AATCTTTCTC CCGGCTACAT TAATCTGGTC GATCTGCAGT CGAGAGCGGG AAAGAGCGAC
TTTTCATCAA GCGGCAGGCT GGAAAACTAT ATCGCCTTCA TCTTGAAAAA AGGTGATCTA
CGAGGATCGC TCAATGTTCG TTCCGGTTTT GTGCAGCTCG ATGAATTTCG GAATCTGGAG
GAGCAGCAAC AGCCTCTGCT GCTCCCTTCT CATGTTTCCC TGCGGCTTGA CGGTATCTTC
AACAGGGTGG TGTTTGGGGA TATGCAGTTC GATGGGGTCA AGGGTCTTCT GGTACTCGAT
GACGAAAAAC TGGATTTCAG GGATATCTCT GCTGAATCAT TTGGAGGCAA GGTTACCATA
AACGGATACT ACAGTACCAA AGAAGGAATA ACCGATACGG ATTTCAGCAT TACAGCAGCT
GAAATGAATG TGGTCCGCTC ATATAAAGCC ATTAAGCTGC TGGAGACAGT GGCTCCGGTC
GCCGGCTACG CAAAGGGGGA TGTTTCAGCA GACATTTCCA TGAGTTCCCG CCTCGATACA
AATTTCAAGC CGGTTCTTGA AACGCTTACA GGCAAAGGCC GTGTCGGGAC GAAAGGGCTG
GTCATCGAAG AGTTCCCGCC TATCAAAAAG CTTGCTCTTC TTCTCGATGT TCAGGCCCTC
GATACGCTCA GGATACCTGA GACGGCGATT GATTTCGCAA TCGATAACGG GCTGGTAACT
ACCGAACCGT TTTCATTCTC CGTTAATGAT ATAACCGTTA ACGGTTCCGG GGTCACCGGT
TTTGATAAAA CCCTTGATTG GAAAATCGGG CTTCAAATCC CCAAAAAATA TATCGGTCAG
GCAGGGATTA CAACCATTTC AGGCCTGCTT CAGAAACTTT CACTGGATAA CAAGGGGTTT
TCTCTTCCTG ACACGGTTCT TGTGGACGCG GCGTTACGAG GCTCGGTCAC CAGCCCTCAG
ATCGGCCTTG ATGTTGGAAG GACTGCTGAA CGTATGGTGT CGCGCATCAA GGAGCGTGTC
ACAGAGAAAA TTAGCGAGGA AATTCGCGAT AGACTTCTGC CCGGATCAGG TGGCGACAGT
ACAGATGTTG ACAGTGGGAG CGTGACTGAC CTTTTGAAAA AGGGCGCAGA GGAGATTCTG
TTTAAGAATA AACAGCAGCC CGCTGAAGAT AGTGCGGCAG AAGAAGGAAG AGGAAAAACA
AAAACAGGGT TGCCTGCGAT TATCGGTAAT ATATTGGCTC CTCAGGAAAA ACCTGGTGTT
GAGCAGCTAA AAGAGGTTGA TGCTGAAAAA TCTCCCGGCG GAGTCGAAGA CAGCTCCGGT
AGTGAGCAGC CGCAAGATTC GACCTCTCAA AGCGGGTCTG GAGAGAATCC GGCAGGGGCA
CGAACCATTC TTGACCTGGT TCGATGA
|
|---|
| Protein sequence | MSKFLKYFLL ILVLVMTSGF IVLQVLKPRL NGFIKQALNS AVDANVDYGD ADISIFQAFP
AVSLSCKDLQ VLDKNVSGMD ILATAEKFSV AFDPFSVFSG ELKIASLRVD RPMIHIRIDS
AGRNNWDVFP PADPSKSSQE LSGLNLLFRD FKIKDGYIVF YDSKKNNSFL VQGFNYEMKG
RLGGRSSTLR TSSVMDSLSV TIGGMSLLDK TRASFTAEIA ADLENRKFQL KDNRLALNEM
GIVLDGTVSL LDDAVNTDLD FRADNIELKE LLSLLPVLYE NNYKKLDARG GVRFAGHVKG
LYRKEQLPAF ELALDVSDGS FGYEGVPVRA EEISFSSSVT NPGGDADKTL LSVPELTLRI
NGKPVVMKLD VKTPVSDPYI DAAINGSLNL SDFQKIYPAK DLQLSGELRS NVVVKGNLSA
FNAGVTGLKR TEAYGSIMAK GVKISSEKFT PDIAISSAQL NLSPGYINLV DLQSRAGKSD
FSSSGRLENY IAFILKKGDL RGSLNVRSGF VQLDEFRNLE EQQQPLLLPS HVSLRLDGIF
NRVVFGDMQF DGVKGLLVLD DEKLDFRDIS AESFGGKVTI NGYYSTKEGI TDTDFSITAA
EMNVVRSYKA IKLLETVAPV AGYAKGDVSA DISMSSRLDT NFKPVLETLT GKGRVGTKGL
VIEEFPPIKK LALLLDVQAL DTLRIPETAI DFAIDNGLVT TEPFSFSVND ITVNGSGVTG
FDKTLDWKIG LQIPKKYIGQ AGITTISGLL QKLSLDNKGF SLPDTVLVDA ALRGSVTSPQ
IGLDVGRTAE RMVSRIKERV TEKISEEIRD RLLPGSGGDS TDVDSGSVTD LLKKGAEEIL
FKNKQQPAED SAAEEGRGKT KTGLPAIIGN ILAPQEKPGV EQLKEVDAEK SPGGVEDSSG
SEQPQDSTSQ SGSGENPAGA RTILDLVR
|
|---|
| |