| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1202 |
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| Symbol | |
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| ID | 6374879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1300067 |
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| End bp | 1301266 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642683702 |
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| Product | internalin-related protein |
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| Protein accession | YP_001959617 |
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| Protein GI | 189500147 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.83099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACAGA TCACCTATAA CAATTGCCCT GTCTGCAGCT ACCCCCTGTC TGCAGAAAAC
GCAGTCTGTC CCCGTTGCGG CAATGACATT CTCGAAGATA TTTCCTCGCT TGATGAACAA
ACTCAGGAAA AGCACATAAG GATCATAGAC GAGAAAAAAG CCGCATGGTA CACACGATGT
GTCGCCGACA AGCTGAATTG CTGTGAAATG CAGCCGCCGA GTGACGAACA AGCAGAGAGT
TCCTGTCATG TTTCCATGGA AAAAGGTGGC AAGCTGGTTG ATTCACCTGT TTTTTCACTT
CCGCGCAAAC AACTGCTTGA AGACCGCTCG AAAAGGAGTG AGTGGTGGAA CTCACTGAAT
GCTGACTGGA AAGAAGTTGT TAAAAACACC ATTAAGTCAT CCAGCGACCC TTCAGACCAG
GAGTTGCTGG ATTTCTTCAC TGTCAAACAC CTGAGATGTG ATAACCGCAG AATTCACAGC
CTTGCCCCTG TCAGGGTGCT CGAAAAACTG CAGCAACTGC GGTGTGACGA ATCTCCCATT
GAAAACCTTG AACCGCTCAG GGAAATCACA TCACTGCAAA GGCTCTACGC CTTCGACTGT
GATTTCTCCT CTCTGGAACC CCTGAGGGGC TTGCTGAGTC TGAAGCTGCT CTGGATATCG
AGCACTGAAG TCAGTGACCT TGATCCGGTA AAGCATATGA TCAATCTTGA AGAACTCTAT
TGTTCTGAAA CACCTGTCAG CGACCTTTCC CCTCTATCAG AATTGAGCAA GCTTGAAAAA
ATAAGCTGCT ACAAAACCGA GATTTCATCA CTCAAACCAC TTGAAAAACT TGAAAATCTC
ATAGAGCTTG GCTTCAACAG TACCCTGATT GACGACCTCT CTCCTTTAGC CGACCTTGAA
AATCTCGAAT ATCTGCGTTT CAGTCGCACC GATATCAGTT CTCTTGAACC GCTTTCATCG
CTGATAAACC TGAGGGAACT GAGCTTTAAT GAAACCTTCG TTGCGTCACT CGAGCCGCTT
GCCGGATTGT CTGAACTTGA AGAGATCTCC TTCGCGAACA CAAACGTCAC CACGATAGCT
CCGCTGATGC ACCTCACCTA CCTTGAAAAG ATAGAGCTGA CAGCAGGCCA GATAAGGAAT
GAAGAACTTG AACAGTTCCT CGAGCTTCAC CCTGATTGCG AAATACTCTT GAAAAAATAA
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| Protein sequence | MKQITYNNCP VCSYPLSAEN AVCPRCGNDI LEDISSLDEQ TQEKHIRIID EKKAAWYTRC
VADKLNCCEM QPPSDEQAES SCHVSMEKGG KLVDSPVFSL PRKQLLEDRS KRSEWWNSLN
ADWKEVVKNT IKSSSDPSDQ ELLDFFTVKH LRCDNRRIHS LAPVRVLEKL QQLRCDESPI
ENLEPLREIT SLQRLYAFDC DFSSLEPLRG LLSLKLLWIS STEVSDLDPV KHMINLEELY
CSETPVSDLS PLSELSKLEK ISCYKTEISS LKPLEKLENL IELGFNSTLI DDLSPLADLE
NLEYLRFSRT DISSLEPLSS LINLRELSFN ETFVASLEPL AGLSELEEIS FANTNVTTIA
PLMHLTYLEK IELTAGQIRN EELEQFLELH PDCEILLKK
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