| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1151 |
|---|
| Symbol | |
|---|
| ID | 6374826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1240947 |
|---|
| End bp | 1243178 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642683653 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001959570 |
|---|
| Protein GI | 189500100 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.515935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0297929 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAT CAATCACCAT CTCCAGTATT GCAACCTTCG GAACAACGCC GGAGCAAGTC
AACGCGCTTT CCCTATTCAA CTTCTTTTTC GGATCAAATG GCACCGGCAA AACAACCCTC
AGCCGAGTGA TCGCGGATGA AACAAAGTTC CCGATGTGCA GTGTCAGTTG GAAAGCGGGG
ACTAAACTAC AGCCGCTTGT TTACAACCAC GATTTCGTCG AGCGAAACTT CAACCAATCG
GTAGAGCTAA AGGGAGTCTT TACGCTGGGT GAGAAGCAAG TTGACACACT CGCGAAGATA
ACTACGACCA AAAGCGAACT CGATGCGCTT TCCGCCAGGA TCGAAACGCT AACTAAAGGG
CTACAGGGCG AAGATGGAAA TAGCGGCAAG AAAGGAGAGT TGGCAACACT TGACGCTGGA
TTGAAAGACA AGTGTTGGGC GCAAAAGCAG AAGCATGATG CCAAATTGCA AGGAGCCTTT
GAGGGGTATC GGAACAGTTC TGAGAAGTTC AAAGGAAAAG TACTTCAGGA ACTAGCAGCG
AATAAGGCGA CCCTCCTCAC CTTAGTGGAG TTGGAAAAAA AGGCTGAAAG CGTCTTCGGA
CCTACGCCGA CAAAAGAAGC ACCTGTTCCC TCCGTCGATG CATCTAAGCT TCTTGCGAAC
GAGGCGAATC CCATTCTGAA GAAGCGCGTT TTCGGCAAAG AAGACGTCGA TATCGCTGCG
ATGATTAAAA AACTCGGGAA TAGTGACTGG GTTCGGGAAG GAAGGACATT CTACCACGTG
AACGAGGGCG TCTGTCCCTT TTGCCAGCAG AGCACAAGCG AAGCGTTCGC TCTAAGCCTG
AACGAATACT TCGACGAGAC ATTTGTGGCA GACAGCAAAG CGATCGACGA CCTCGCCACG
GACTACGCCA CCGAGGCGGC CCGGATTCAG GATCAATTTA CTTCAATCAT CGCCTCACCA
TCCAAGTTTC TCGATGTCGA GAAGCTTAAA GCAGAAAAGG ACTTACTCGA TGCGAGAATC
ACACTGAATA ATCAGCGCCT AGCCGGAAAG AAAAAGGAGG CAAACCGGGT GGTCGAGCTG
GAATCGCTAA GTAGTGTCTC CGCGGCAATA AAAGACCTAA TCGATGCGGC CAACACCCAA
GTGGCGTCAC ACAACAAAAT CGTCGCAAAC CTCACATCTG AGCGGAATAC CCTGACTGCG
CAAGTGTGGA AGTTCGTCCT CGAAGAGTTG AAAGCTGACC TCACTGCGTT CAAGACCGCC
AAAGACGGTT TGGACAAAGC CATCTCGGCA ATGACAACTC AAGTCACCAA TGCGACAACG
GACAAGGCAA AGAAGGTGGC TGATCTTCGC GAACTGGAAA AGCAAACGAC CAGCATCCAA
CCGACAATTG ACGGCATCAA CAGTCTTCTT TCGTCGTTTG GATTCCAAGG CTTTAAGCTC
GCGAAAGCGG CAACCGGGAC TTCCTATAAG TTGGTTCGTT CGGATGGTTC TGATGCTAAG
GCGACATTGA GCGAAGGTGA GAAGACGTTC GTTACTTTCC TCTATTTCTA CCACCTGCTC
AAAGGCAGCG ACTCAGAAAG CGGGATGACA ACTGACCGTG TAGTTGTCTT TGACGACCCA
GTTTCTAGTC TCGACAGCGA TATTCTCTTC ATCGTCAGCA GTCTCATCAA AGGACTATTC
GATGAGGTGC GTTCAGGTTC GGGTCACATA AAACAGATCT TCGTTCTTAC GCACAACGTC
TATTTCCACA AGGAAGTCAC CTATAACCCA AAGCGGAAGG ATGTCGCGAT GAACGAGGAG
AGTTTTTGGA TCGTGCGCAA ACCCGGGCTA GCCACAAAAA TTGAGAATCA CACGACGAAT
CCGATCAAAA CGTCCTACGA GCTGCTCTGG GCCGAGGTTC GCAAACCCGA GCGCTCGAAT
CTCGCTATCC AAAATACGCT GCGGCGCATC CTCGAAAACT ACTTCAAGAT TCTTGGAGGC
ATTGACTTTG ACCAGCTATG CGCGTTGTTC AAAGGAAGAG AGAAGATAAT CTGCAAGTCG
CTCTGCTCCT GGGTGAATGA TGGATCGCAC TACGCGCACG ATGATCTCTA CGTTTCAATC
GATGATTCCT TGGTGGACAC CTACCTCACG GTATTTAGGG CAATTTTCGA CAAGTCTGGC
CACAGTTCGC ATTACAAGAT GATGATGGGT GATGCCTACG TGGACGATAT ATCTGAAGCA
GCGCAGGCCT GA
|
|---|
| Protein sequence | MIESITISSI ATFGTTPEQV NALSLFNFFF GSNGTGKTTL SRVIADETKF PMCSVSWKAG
TKLQPLVYNH DFVERNFNQS VELKGVFTLG EKQVDTLAKI TTTKSELDAL SARIETLTKG
LQGEDGNSGK KGELATLDAG LKDKCWAQKQ KHDAKLQGAF EGYRNSSEKF KGKVLQELAA
NKATLLTLVE LEKKAESVFG PTPTKEAPVP SVDASKLLAN EANPILKKRV FGKEDVDIAA
MIKKLGNSDW VREGRTFYHV NEGVCPFCQQ STSEAFALSL NEYFDETFVA DSKAIDDLAT
DYATEAARIQ DQFTSIIASP SKFLDVEKLK AEKDLLDARI TLNNQRLAGK KKEANRVVEL
ESLSSVSAAI KDLIDAANTQ VASHNKIVAN LTSERNTLTA QVWKFVLEEL KADLTAFKTA
KDGLDKAISA MTTQVTNATT DKAKKVADLR ELEKQTTSIQ PTIDGINSLL SSFGFQGFKL
AKAATGTSYK LVRSDGSDAK ATLSEGEKTF VTFLYFYHLL KGSDSESGMT TDRVVVFDDP
VSSLDSDILF IVSSLIKGLF DEVRSGSGHI KQIFVLTHNV YFHKEVTYNP KRKDVAMNEE
SFWIVRKPGL ATKIENHTTN PIKTSYELLW AEVRKPERSN LAIQNTLRRI LENYFKILGG
IDFDQLCALF KGREKIICKS LCSWVNDGSH YAHDDLYVSI DDSLVDTYLT VFRAIFDKSG
HSSHYKMMMG DAYVDDISEA AQA
|
|---|
| |