| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1145 |
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| Symbol | |
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| ID | 6374820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1228110 |
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| End bp | 1229336 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642683647 |
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| Product | putative transcriptional regulator, TetR family |
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| Protein accession | YP_001959564 |
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| Protein GI | 189500094 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.239655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTC GAGACTTTCT CCTGCAAAAA CAACATATCC CGGAGAAGAA AGTCCCGTAT
TATCTTCGAT GGGTGTCGCA GTATCAAAAA TTCTGCCGCC ATAACCCGGA TCAGGGAATC
CCCCCTGAAT CGGTAACTTT ATTCCTTTCA GAGTTGGCAA AAAGCCATGA AGACTGGCAG
GTTTTGCAGG CAAGAGATGC GGTAAGGCTG TATCTGTATT TTTCCGACAC CTCTCTTAGC
ATTAACCGTA CAGTGCCGTC ATGCGATCAT GAATGGACCG AGATCGACGA AAGAATGACA
CATGCTCTCC GTCTTCGCCA CCGCTCATAT CGGACAGAAC AAAGCTATAA AGCTTGGGTC
AGACGTTTTG GCGCGTTTCT TGAACATAAG TCACCTCAAG CTGTTGAACA GTCCGATCTT
CAACGATTTC TCAGCAGCCT TGCGGTCGAG AGAAGAGTTT CGGCTTCTAC CCAGAATCAG
GCGTTTAATG CGCTTCTTTT TCTTTTCCGT CATGTTCTCG ACAAAAAGGT TTCTGGAATG
GAAGCAACTG TTCGTTCGAA CAGACCAAGA AAATTACCGG TTGTCCTTTC GCGGGAAGAG
GTTCGAAGCA TTCTTGAGAT CATGAATGAA GTCACCTGGT TGATGGCCTC ATTGATTTAT
GGAGGAGGAC TTCGCATTGA TGAATGTCTG AAACTGAGAA TCAAGGATAT CGATTTCGAC
AGAGGATTCC TGACCGTGAG AAGCGGCAAG GGTAACAAGG ACCGTCAGAC GCTTTTTCCG
AAAAATCTTG CAGAACCATT GCGAAATCAT CTATCTGAAA TCAGGAACAT TCACGAAGAG
GACAGACGCA ACGGTATCGA GGGTGTTTCG ATGCCCGGGG CCCTTGCATA CAAATATCCC
AATGCCGGAA AAGAATGGGG CTGGTTCTGG GTGTTCCCTT CGGCGAACTT GTCGGCCGAT
CCAGTAACGA ACACCATAAG ACGCCACCAC ATGTACCCGA CGACAGTGCA AAAGGCGTTT
AAACAGGCTC GTGAGAAAGC CGGAGTTGTC AAACAGGCAT CTGTGCACAC GCTCAGACAC
AGCTTTGCGA CGCATTTGCT GGAAGCTGGC TATGATATCC GAACCGTGCA GGAATTACTT
GGCCATGCCA ATCTGCAAAC AACGATGATC TACACGCACG TGGCAAAAAA AAATATGCTG
GGTGTCGTCA GTCCTCTGGA TATGTAA
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| Protein sequence | MNFRDFLLQK QHIPEKKVPY YLRWVSQYQK FCRHNPDQGI PPESVTLFLS ELAKSHEDWQ
VLQARDAVRL YLYFSDTSLS INRTVPSCDH EWTEIDERMT HALRLRHRSY RTEQSYKAWV
RRFGAFLEHK SPQAVEQSDL QRFLSSLAVE RRVSASTQNQ AFNALLFLFR HVLDKKVSGM
EATVRSNRPR KLPVVLSREE VRSILEIMNE VTWLMASLIY GGGLRIDECL KLRIKDIDFD
RGFLTVRSGK GNKDRQTLFP KNLAEPLRNH LSEIRNIHEE DRRNGIEGVS MPGALAYKYP
NAGKEWGWFW VFPSANLSAD PVTNTIRRHH MYPTTVQKAF KQAREKAGVV KQASVHTLRH
SFATHLLEAG YDIRTVQELL GHANLQTTMI YTHVAKKNML GVVSPLDM
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