| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1124 |
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| Symbol | |
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| ID | 6374799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1210571 |
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| End bp | 1212361 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642683626 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001959543 |
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| Protein GI | 189500073 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.331825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.414792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGTTT CGCATGTTTA TAGAGTTCCA CTGCTCCTGT TTGTTTTGTT GACGGCGGTA
TATTCCAATG GATTTGCTGC ACGTGATGAC AGAGTGCCGG ACGATACGAA GGTAGCTGAA
ATACTTGACC GTCTTGTGAC ATCTGAATAT TTCAGCGACA GCCATTTCAA GGAGTGGAAA
GATGGCGGCG TCAATGGTTA TCCTTCGCTT TTTATTCCAC AGTTCGACGA TCAAACCTAT
TCGCAGCGAA TAGCACAGCT GAACAGCAGG ACACAGCTCA AACTGGTCTA TAACAGCCAT
GTTAAAAGCT TTATCAGGCT GTATTCGGTG GATAAACGGA GGCTCACCGC GAAGATTCTG
GGCCTTACAG AGTTGTATTT TCCACTATTC GAGGAGAAAC TGCGGCAGTA CCGTATTCCT
CTTGAGCTGA AATACCTTGC CATTGTCGAA TCCGCTCTCA ATCCTTCCGC CGTATCAAGC
GCCAACGCGA AAGGTCTGTG GCAGTTCATT TACGGAACCG GCAAAATGTA CGGGCTAGAG
TCCTCTCCAT TTGTCGAGGA TCGTTTTGAT CCTGAACAAG CAACCGTCGC CGCATGCCGG
CACATGAGGG ACCTGTATAA CATATATGGT GACTGGTTTC TGGTGCTTGC CGCCTATAAC
TCGGGGGCGG GTAATGTCAA CAAGGCTATT CGCCGTTCGG GCGGAGCAAG AGACTACTGG
AAGATCTGGT CGAACCTTCC TTCTGAAACC AGAGGGTACG TACCGGCATT TATTGCGGTT
ACCTATATCA TGAACTACTA TAACGAGCAT AATATCCGGC CTCTGGAGCC TGTTTATTCT
TATCGCGATA TCGGTTCAGT GAAAGTTTCA GACGTGATCG CGTTTGATCA GGTCAGTGAA
ATGATCGGGA TTTCCGTTGA GGATCTTCAG TTTCTCAATC CTCAGTTCAA GCTGAACCTT
GTGCCTGCGA ATGCCCGGAA TACCTACTAT CTGAGGCTGC CCAAAAAATA TCTCGACAAG
TTCGCGCGGA ATGAAAAAAA AATCTATGCA AAAAAGAGCA GGCAGGGACT TGACGGTGCG
GCTCTACTGG CAAGAATCCG TGAAACAAAG AAAGAGCCCA GAGCAGGAAA ACAGAATATC
CATGTCGTCA GGCGTGGCGA GACCCTCGCC TCCATAGCAC GTTCCTACCG CTGTTATGTC
AGTCAGCTCA TCCAGTGGAA TTCTCTGAAG GACTTCAGGA TCTATCCCGG CCAGAAAATC
AGGGTTTTCG GCGCACCGGC ATCTTCTGTC CGGGTCGGCA ATAAAGCTTC TTCGATGGCT
TATCATAAGG TTCGTCGGGG AGAAAGCCTT GGGTTGATCG CTAAAAAGTA TGGCGTTTCG
ATGAGCAAGC TGGTTTCATG GAACAACCTC GGCAGAAAGC GCACGATCTA TCCCGGCCAG
AAGCTCAAGG TCTACGGTGT ATCATCTTCC ACATCATCAG CATCCACAGC AAAGGCGACA
TACCACAAGG TTCGTCGTGG AGAAAGCCTT GGGTTGATCG CTAAAAAGTA TGGCGTTTCG
ACGAGCAAGC TGGCTGCATG GAACAATCTT GGCAGCAAGC GTACGATCTA TCCGGGGCAG
CGTCTCAGGT TGTCCCCCGC GACGAAAATT CACAAGGTTC GTCGGGGAGA AAGTCTGGGA
CTGATCGCTA AAAAATACGG TGTCACGATC GGCAAGCTGG CTTCATGGAA CAATCTCGGC
AGAAAGCGCA CGATCTATCC CGGTCAGAAG CTGAAAATTC GGACAAACTG A
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| Protein sequence | MRVSHVYRVP LLLFVLLTAV YSNGFAARDD RVPDDTKVAE ILDRLVTSEY FSDSHFKEWK
DGGVNGYPSL FIPQFDDQTY SQRIAQLNSR TQLKLVYNSH VKSFIRLYSV DKRRLTAKIL
GLTELYFPLF EEKLRQYRIP LELKYLAIVE SALNPSAVSS ANAKGLWQFI YGTGKMYGLE
SSPFVEDRFD PEQATVAACR HMRDLYNIYG DWFLVLAAYN SGAGNVNKAI RRSGGARDYW
KIWSNLPSET RGYVPAFIAV TYIMNYYNEH NIRPLEPVYS YRDIGSVKVS DVIAFDQVSE
MIGISVEDLQ FLNPQFKLNL VPANARNTYY LRLPKKYLDK FARNEKKIYA KKSRQGLDGA
ALLARIRETK KEPRAGKQNI HVVRRGETLA SIARSYRCYV SQLIQWNSLK DFRIYPGQKI
RVFGAPASSV RVGNKASSMA YHKVRRGESL GLIAKKYGVS MSKLVSWNNL GRKRTIYPGQ
KLKVYGVSSS TSSASTAKAT YHKVRRGESL GLIAKKYGVS TSKLAAWNNL GSKRTIYPGQ
RLRLSPATKI HKVRRGESLG LIAKKYGVTI GKLASWNNLG RKRTIYPGQK LKIRTN
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