Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1112 |
Symbol | |
ID | 6374786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1195518 |
End bp | 1196483 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642683613 |
Product | PSP1 domain protein |
Protein accession | YP_001959531 |
Protein GI | 189500061 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAATG TTATATGCAG TTGTACGTTA GGTGACTATG CAAAGGTTCG TTTACAGCTT TCACGCATGT TGCATCGTGA AATTGAACAG CTTTACGGTG AAGAAAAGAA TGGCAAAGAT ATATGCGAGA TCGAACTGAA ATGCTGTCGC AGGGAGTTTT TCATAAACGC TACAGGTGAG GCATCGGATA TCGGAACGGC GGTTATCGTT GAGGCTGACG GTGGTTTTGA CTACGGGATT GTCTATTCGA CAGGAGCCAT TGCCCGTAAA AAGATGCAGT TGAAGGGCAT AGATCAGAGT AAGGAGACTC TGGGAAATAT AGTGCGTTTT GCCGATGAAC ATGACAAAGA GGAGCTGCAT TCGGTGAGGG AGAGAGAGCC GGAGATTCGT GATGTGTGTA TGGCGAAGAT CAAGGGGCAT AGACTTGATA TGAAGCTTGT CGATGTGGAA CTTCGTATGG ACCAGCAAAA AGTAACGGTT TTTTATACAG CGACACACAG AGTGGATTTC CGTTCTCTTG TACGGGATCT TGCAAGTGAG TTCAAGGCAA GGATCCAGAT GGTGCAGATC ACCTCCAGGG AGGAAGCCCG GAGGGCCAAC ACTTTCGGGG CTTGCGGTTG TGTCTTATGC TGCTCAAGCT GGATACAGAA AATTCATGCC AATCCTTTCG CGGAAAAACA GAACGGATAT GAAAATTCCC ATGGCGAGAA TCACTCCTTT AATGTTATCG GCCAGTGCAA TCGCCCCAAG TGCTGTCTCA GTTATTCCAG GAATGACAAG TGCTCCAAAA AATCCCGGCC GAACAGCTAT CCGCCATTGG GCAGCAAAGT GACTACTGCC GAGGGAATCG CTATTATCGA AGGCATCGAT CCGGCAAAAA AAGAAATTTC TCTTCGTTAT CTGACGGACG GAAAAGAGGT CATCATGCCG ATAGAGGAGT TTAAGGCGTT GTTTGTCAAG AAGTAA
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Protein sequence | MGNVICSCTL GDYAKVRLQL SRMLHREIEQ LYGEEKNGKD ICEIELKCCR REFFINATGE ASDIGTAVIV EADGGFDYGI VYSTGAIARK KMQLKGIDQS KETLGNIVRF ADEHDKEELH SVREREPEIR DVCMAKIKGH RLDMKLVDVE LRMDQQKVTV FYTATHRVDF RSLVRDLASE FKARIQMVQI TSREEARRAN TFGACGCVLC CSSWIQKIHA NPFAEKQNGY ENSHGENHSF NVIGQCNRPK CCLSYSRNDK CSKKSRPNSY PPLGSKVTTA EGIAIIEGID PAKKEISLRY LTDGKEVIMP IEEFKALFVK K
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