Gene Cphamn1_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1112 
Symbol 
ID6374786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1195518 
End bp1196483 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content47% 
IMG OID642683613 
ProductPSP1 domain protein 
Protein accessionYP_001959531 
Protein GI189500061 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAATG TTATATGCAG TTGTACGTTA GGTGACTATG CAAAGGTTCG TTTACAGCTT 
TCACGCATGT TGCATCGTGA AATTGAACAG CTTTACGGTG AAGAAAAGAA TGGCAAAGAT
ATATGCGAGA TCGAACTGAA ATGCTGTCGC AGGGAGTTTT TCATAAACGC TACAGGTGAG
GCATCGGATA TCGGAACGGC GGTTATCGTT GAGGCTGACG GTGGTTTTGA CTACGGGATT
GTCTATTCGA CAGGAGCCAT TGCCCGTAAA AAGATGCAGT TGAAGGGCAT AGATCAGAGT
AAGGAGACTC TGGGAAATAT AGTGCGTTTT GCCGATGAAC ATGACAAAGA GGAGCTGCAT
TCGGTGAGGG AGAGAGAGCC GGAGATTCGT GATGTGTGTA TGGCGAAGAT CAAGGGGCAT
AGACTTGATA TGAAGCTTGT CGATGTGGAA CTTCGTATGG ACCAGCAAAA AGTAACGGTT
TTTTATACAG CGACACACAG AGTGGATTTC CGTTCTCTTG TACGGGATCT TGCAAGTGAG
TTCAAGGCAA GGATCCAGAT GGTGCAGATC ACCTCCAGGG AGGAAGCCCG GAGGGCCAAC
ACTTTCGGGG CTTGCGGTTG TGTCTTATGC TGCTCAAGCT GGATACAGAA AATTCATGCC
AATCCTTTCG CGGAAAAACA GAACGGATAT GAAAATTCCC ATGGCGAGAA TCACTCCTTT
AATGTTATCG GCCAGTGCAA TCGCCCCAAG TGCTGTCTCA GTTATTCCAG GAATGACAAG
TGCTCCAAAA AATCCCGGCC GAACAGCTAT CCGCCATTGG GCAGCAAAGT GACTACTGCC
GAGGGAATCG CTATTATCGA AGGCATCGAT CCGGCAAAAA AAGAAATTTC TCTTCGTTAT
CTGACGGACG GAAAAGAGGT CATCATGCCG ATAGAGGAGT TTAAGGCGTT GTTTGTCAAG
AAGTAA
 
Protein sequence
MGNVICSCTL GDYAKVRLQL SRMLHREIEQ LYGEEKNGKD ICEIELKCCR REFFINATGE 
ASDIGTAVIV EADGGFDYGI VYSTGAIARK KMQLKGIDQS KETLGNIVRF ADEHDKEELH
SVREREPEIR DVCMAKIKGH RLDMKLVDVE LRMDQQKVTV FYTATHRVDF RSLVRDLASE
FKARIQMVQI TSREEARRAN TFGACGCVLC CSSWIQKIHA NPFAEKQNGY ENSHGENHSF
NVIGQCNRPK CCLSYSRNDK CSKKSRPNSY PPLGSKVTTA EGIAIIEGID PAKKEISLRY
LTDGKEVIMP IEEFKALFVK K