Gene Cphamn1_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0974 
Symbol 
ID6374642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1048605 
End bp1049411 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content46% 
IMG OID642683474 
Productprotein of unknown function DUF164 
Protein accessionYP_001959398 
Protein GI189499928 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.214603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCATA CAAAAATCAA TCTTGTTGTT CGTCTGCAAC ATCTCGACAA TCAAATCGAA 
AGCATAGAAA GTCTCCAAAG AGGACTTCCG GAAGAAATCG AAGCGCTTGA AGAAGATATT
GCCTTTACCT CACGTCAAAT CGAATCCAGA GCAAAAGTCG CAAACGAACA GCAGACAATG
CTTAAAAAGT TGACTGAAAC GGTTGACAAT TCCAGAGAGA AGATCAAGGG CTTCAAAGAG
AAACAGACTC TGGCCAGAAA TAACAAGGAA TATGACGCCC TGTCCAAGCA GATTGAATAC
GAAGAAAAAG AGATCGCGCA GGCCGAGATC AAGCTGCAGG ACATAGCACA CAAAGAAGAG
AAAACAAAAG AGCTCCAGGA TCAGGGTCGT CAGTTAATTG CTGAAAACCG CTATGACGAG
ATTTCTGAGA ATATGATACC TGACGATGTC CTGAGTCAGC AGCTCAAGGA CCTGCAGGTA
CAGGTAGAGC AAAAGAAAGA AGAACTTGAG AGTATCGTGG TCGAAACGTC AGCGGAAGTC
AGTTCTCTGA AGAAACAGAT CAGCGAACAA AGAGCAGTGG TAGAAAAAGA TGCGAAACGC
CTTCTCTCAA AGTACGACCA TCTTAAAAAC GGCAACGTCC AGAACGCTCT TGTAAAACTT
CATCGCCAGG CCTGCTCCGG CTGCAACACC CGCGTTCCTA CCAACCGCCA CACCATCATC
GTTCAGGGCG GATTCTATCT CTGTGAATCA TGCGGGCGAA TAGTGGTCCA TGAAAGGCTT
TTTGAAGAAG CTGCCGACAT GTCCTGA
 
Protein sequence
MDHTKINLVV RLQHLDNQIE SIESLQRGLP EEIEALEEDI AFTSRQIESR AKVANEQQTM 
LKKLTETVDN SREKIKGFKE KQTLARNNKE YDALSKQIEY EEKEIAQAEI KLQDIAHKEE
KTKELQDQGR QLIAENRYDE ISENMIPDDV LSQQLKDLQV QVEQKKEELE SIVVETSAEV
SSLKKQISEQ RAVVEKDAKR LLSKYDHLKN GNVQNALVKL HRQACSGCNT RVPTNRHTII
VQGGFYLCES CGRIVVHERL FEEAADMS