Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0974 |
Symbol | |
ID | 6374642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1048605 |
End bp | 1049411 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642683474 |
Product | protein of unknown function DUF164 |
Protein accession | YP_001959398 |
Protein GI | 189499928 |
COG category | [R] General function prediction only |
COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.214603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCATA CAAAAATCAA TCTTGTTGTT CGTCTGCAAC ATCTCGACAA TCAAATCGAA AGCATAGAAA GTCTCCAAAG AGGACTTCCG GAAGAAATCG AAGCGCTTGA AGAAGATATT GCCTTTACCT CACGTCAAAT CGAATCCAGA GCAAAAGTCG CAAACGAACA GCAGACAATG CTTAAAAAGT TGACTGAAAC GGTTGACAAT TCCAGAGAGA AGATCAAGGG CTTCAAAGAG AAACAGACTC TGGCCAGAAA TAACAAGGAA TATGACGCCC TGTCCAAGCA GATTGAATAC GAAGAAAAAG AGATCGCGCA GGCCGAGATC AAGCTGCAGG ACATAGCACA CAAAGAAGAG AAAACAAAAG AGCTCCAGGA TCAGGGTCGT CAGTTAATTG CTGAAAACCG CTATGACGAG ATTTCTGAGA ATATGATACC TGACGATGTC CTGAGTCAGC AGCTCAAGGA CCTGCAGGTA CAGGTAGAGC AAAAGAAAGA AGAACTTGAG AGTATCGTGG TCGAAACGTC AGCGGAAGTC AGTTCTCTGA AGAAACAGAT CAGCGAACAA AGAGCAGTGG TAGAAAAAGA TGCGAAACGC CTTCTCTCAA AGTACGACCA TCTTAAAAAC GGCAACGTCC AGAACGCTCT TGTAAAACTT CATCGCCAGG CCTGCTCCGG CTGCAACACC CGCGTTCCTA CCAACCGCCA CACCATCATC GTTCAGGGCG GATTCTATCT CTGTGAATCA TGCGGGCGAA TAGTGGTCCA TGAAAGGCTT TTTGAAGAAG CTGCCGACAT GTCCTGA
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Protein sequence | MDHTKINLVV RLQHLDNQIE SIESLQRGLP EEIEALEEDI AFTSRQIESR AKVANEQQTM LKKLTETVDN SREKIKGFKE KQTLARNNKE YDALSKQIEY EEKEIAQAEI KLQDIAHKEE KTKELQDQGR QLIAENRYDE ISENMIPDDV LSQQLKDLQV QVEQKKEELE SIVVETSAEV SSLKKQISEQ RAVVEKDAKR LLSKYDHLKN GNVQNALVKL HRQACSGCNT RVPTNRHTII VQGGFYLCES CGRIVVHERL FEEAADMS
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