Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0969 |
Symbol | |
ID | 6374636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1043932 |
End bp | 1044867 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642683470 |
Product | Squalene/phytoene synthase |
Protein accession | YP_001959394 |
Protein GI | 189499924 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.641353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTACA GCTATAATGG AAAAACGATT GTGCGAGGGT CCGGCCGGGA ACTGACGCTT CAAAACGCCT ACAACTACTG CCGTCAGATA GCAAAACATC ACGCCAAAAC CTTTTACCTC GCCACTCTGT TTCTCTCGAA AAATCAGCGC GATCCGATTT ACGCCATGTA TGCCCTGCTC AGAACGGTCG ATGACCTCGT TGACATGGCG GAAGACAAAA TCACAAACGG CACCCTCACC CGCGAGGAAT TAAGCTCCAT GATGGCTGAC TGGAAAACCC GCCTCCATGA ATGCTATGAA GGGAATCACA ACAATGACCC GATCATGATG GCATGGCAGA ACACCCTGGC CAGTCACAGC ATTCCGATTG AACTGCCGCT GGACCTTATG GACGGCGTCA CCATGGACAT TGATTTCAAA CCTTTCGAAA CCTTCGACGA CCTCTATGTC TACTGCTACA AAGTAGCCTC TGTTGTCGGA TTGATGTGTT CTGAAATTTT CGGCTACTGC GATAAAAAAG CGCTGGACCA CGCCATTGAA CTTGGCATAG CCATGCAACT CACCAATATA CTTCGTGATA TCGGCGAGGA TGTTGACCGC GGCAGGATAT ATCTACCGCT CGAAGATCTC GACCGATTCA ACTATTCCCG TGATGAGTTC ATGCGGAAAG AAATAAATGA TAACTTTAAA GCGCTTATCC GGTTTCAGAT TGAACGGGCA AGAAAATATT ATGCCTCATC CGATCAAGGC ATTCCCATGC TTGAAAAAAA CAGCCGGATT GCTGTAAAGG TGAGCAGCCT GAACTACTGC AACATCCTCA GAGCTATAGA AGAAAACAAC TACGATGTCT TCTCTCAACG GGCTTACCGG TCATTTTTCC AGAAAATAAG CACCATTCCG TATATCTGGC TCGATATGAA GAAGGTGAAC TCATAA
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Protein sequence | MNYSYNGKTI VRGSGRELTL QNAYNYCRQI AKHHAKTFYL ATLFLSKNQR DPIYAMYALL RTVDDLVDMA EDKITNGTLT REELSSMMAD WKTRLHECYE GNHNNDPIMM AWQNTLASHS IPIELPLDLM DGVTMDIDFK PFETFDDLYV YCYKVASVVG LMCSEIFGYC DKKALDHAIE LGIAMQLTNI LRDIGEDVDR GRIYLPLEDL DRFNYSRDEF MRKEINDNFK ALIRFQIERA RKYYASSDQG IPMLEKNSRI AVKVSSLNYC NILRAIEENN YDVFSQRAYR SFFQKISTIP YIWLDMKKVN S
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