Gene Cphamn1_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0953 
Symbol 
ID6374620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1027496 
End bp1029637 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content49% 
IMG OID642683455 
Productglutamine synthetase catalytic region 
Protein accessionYP_001959379 
Protein GI189499909 
COG category[R] General function prediction only 
COG ID[COG3968] Uncharacterized protein related to glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.809756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAACA ATAGCACTAC AGCGGTATCA ACGTATTTTG GTTCCATGAC CTTTGATCAG 
GCGGCCATGC GTAAAAAACT TCCAAAGGAA GTCTATCGGG CATTGCTGAA AACCATTGAG
GCTGGTAACA AGCTTTCTGA GGATATATCG GCGGTTGTCG CTCACGGAAT GAAAGAGTGG
GCAATGGAGC AAGGGGCGAC GCACTATACA CACTGGTTCC AGCCCATGAC CGGATCTACG
GCTGAAAAGC ATGACGCGTT TCTGTCAATT GATGGCGACG GTACCCCGAT CGAGCGTTTT
TCAGGCGGTC AGCTTATTCA GGGCGAACCG GATGCTTCAA GTTTCCCGTC GGGAGGTATG
AGGACAACGT TTGAGGCAAG AGGGTATACA GCCTGGGATC CATCGAGTCC GGCGTTTCTT
ATGAAAGGAG GCAATGGCCT GACACTGTGT ATCCCCACTG TTTTTATCTC CTATCATGGC
GAGGCTCTCG ACGAAAAAAC ACCTCTGCTT CGTTCCATGG ATGCTGTCAG CAAATCGGCA
GTCAGACTTC TCGATATTCT TGGTACGGAA TCCAGCCGTG TCAATACCTA TGCCGGCGCG
GAGCAGGAGT ATTTTCTGAT CGACCGTAAG TTCTATACCA TGCGTCCTGA TCTCGTGATG
ACCGGACGTA CGCTTCTTGG GGCCAATCCG CCAAAAGGCC AGCAGCTTGA AGACCACTAT
TTCGGTTCTA TTCCCGACAG AGTTCTTGAA TTTATGAACG AGGTTGAAAA AGAGCTCTAT
CTGCTTGGCA TTCCTGCAAA AACCCGCCAT AACGAGGTTG CTCCTCACCA GTTTGAGATA
GCGCCTATTT TCGAGAGAGC AAATATCGCG GCAGATCACA ATCTGCTGGT TATGGAGATC
ATGCGAAGGG TTGCCGAGAA GAAAGGATTC GCACTCCTTA TACACGAAAA GCCATTTGGA
GGCATCAACG GTTCCGGAAA ACACAACAAC TGGTCAATCG GTACTGCTGA AGGTATCAAT
CTTCTTGAGC CGGGTGATAC TCCTGAGTCG AATATTCAGT TTTTGGTATT TCTCGTTGCC
GTTCTCAAAG GCGTGTACAA GCGTTCTGCT ATCCTGAGGG CTGCTATTGC CAGTATCGGC
AACGATCATC GTCTTGGCGC AAATGAAGCT CCACCAGCCG TTGTCACTGT TTTCCTCGGT
GAACTGCTGG AGAAGGTGCT CGATGCAATC GAAAGCGGCA AGGTTGATTT TACTACCGAG
AAACAGATTC TTGACCTTGG GCTCGCTCAT ATGCCTGTTC TCAACAAGGA TTATACGGAT
CGTAACCGTA CCTCTCCTTT CGCGTTTACC GGCAACAAGT TCGAGTTCCG CGCTGTCGGT
TCGTCACAGC CTATCTCGAC ACCGAACATG GTACTCAATA CCCTGATGGC GGAAGCTATT
GACGGTATTT CCGAAGAGAT CCAGTCTAAA ATCGATGCTG GTATCGAAAG AGACGCGGCT
ATTCTTGAGG TGATTCGTGC TGAAATTGCT GCAACAAAGG CTGTTCGCTA CCAGGGAGAC
AACTACAGCG ACAATCTTCA GGATGCAGCT GCAGAGCGCG GTCTGCCGAA CATGAAAAAT
ACACCGCAGT CCCTGAGGGC GCTTCTTGAG GAGGATAACA AGAAAATGTT TGCCTCTTAC
AGTGTTCTTT CAAACGAGGA ACTTAATTCG AGGTTGAATA CCCGTCTCGA ACGCTATATC
AAGGGAATCG ATATCGAAGC CCGTACGTTA CAGCTTATGC TCAAAACCTT TGTTATTCCT
GACGTTTCTG AATATCAGGG TGAAATCGCA TCATCGTTCA ACGGACTTAT TGAAGCTGCT
TCACGTATCG GCATCTCAGA CAAAACATTG AAGAGTCAGG GTGATCATCT GAAAGCTCTT
GCCGAAAATC TTTCTGTTCT TATTGATCTG ACCGAAGAAC TCGATGCTGT TATTGTCAAA
CTCGGTGATA TCGAAGAGGA GTTTGACGCG GCTGACTACT GTGCGGACGT TGTGCTTCCT
GCCATGAACA AAGTGCGTGA TGTCGCTGAT CTTCTTGAAC TGATGGTGGA TCGCAGCAAA
TGGCAGCTGC CTACCTATTC CGAAATGCTT TTCGAGCACT AA
 
Protein sequence
MDNNSTTAVS TYFGSMTFDQ AAMRKKLPKE VYRALLKTIE AGNKLSEDIS AVVAHGMKEW 
AMEQGATHYT HWFQPMTGST AEKHDAFLSI DGDGTPIERF SGGQLIQGEP DASSFPSGGM
RTTFEARGYT AWDPSSPAFL MKGGNGLTLC IPTVFISYHG EALDEKTPLL RSMDAVSKSA
VRLLDILGTE SSRVNTYAGA EQEYFLIDRK FYTMRPDLVM TGRTLLGANP PKGQQLEDHY
FGSIPDRVLE FMNEVEKELY LLGIPAKTRH NEVAPHQFEI APIFERANIA ADHNLLVMEI
MRRVAEKKGF ALLIHEKPFG GINGSGKHNN WSIGTAEGIN LLEPGDTPES NIQFLVFLVA
VLKGVYKRSA ILRAAIASIG NDHRLGANEA PPAVVTVFLG ELLEKVLDAI ESGKVDFTTE
KQILDLGLAH MPVLNKDYTD RNRTSPFAFT GNKFEFRAVG SSQPISTPNM VLNTLMAEAI
DGISEEIQSK IDAGIERDAA ILEVIRAEIA ATKAVRYQGD NYSDNLQDAA AERGLPNMKN
TPQSLRALLE EDNKKMFASY SVLSNEELNS RLNTRLERYI KGIDIEARTL QLMLKTFVIP
DVSEYQGEIA SSFNGLIEAA SRIGISDKTL KSQGDHLKAL AENLSVLIDL TEELDAVIVK
LGDIEEEFDA ADYCADVVLP AMNKVRDVAD LLELMVDRSK WQLPTYSEML FEH