Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0953 |
Symbol | |
ID | 6374620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1027496 |
End bp | 1029637 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642683455 |
Product | glutamine synthetase catalytic region |
Protein accession | YP_001959379 |
Protein GI | 189499909 |
COG category | [R] General function prediction only |
COG ID | [COG3968] Uncharacterized protein related to glutamine synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.809756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACAACA ATAGCACTAC AGCGGTATCA ACGTATTTTG GTTCCATGAC CTTTGATCAG GCGGCCATGC GTAAAAAACT TCCAAAGGAA GTCTATCGGG CATTGCTGAA AACCATTGAG GCTGGTAACA AGCTTTCTGA GGATATATCG GCGGTTGTCG CTCACGGAAT GAAAGAGTGG GCAATGGAGC AAGGGGCGAC GCACTATACA CACTGGTTCC AGCCCATGAC CGGATCTACG GCTGAAAAGC ATGACGCGTT TCTGTCAATT GATGGCGACG GTACCCCGAT CGAGCGTTTT TCAGGCGGTC AGCTTATTCA GGGCGAACCG GATGCTTCAA GTTTCCCGTC GGGAGGTATG AGGACAACGT TTGAGGCAAG AGGGTATACA GCCTGGGATC CATCGAGTCC GGCGTTTCTT ATGAAAGGAG GCAATGGCCT GACACTGTGT ATCCCCACTG TTTTTATCTC CTATCATGGC GAGGCTCTCG ACGAAAAAAC ACCTCTGCTT CGTTCCATGG ATGCTGTCAG CAAATCGGCA GTCAGACTTC TCGATATTCT TGGTACGGAA TCCAGCCGTG TCAATACCTA TGCCGGCGCG GAGCAGGAGT ATTTTCTGAT CGACCGTAAG TTCTATACCA TGCGTCCTGA TCTCGTGATG ACCGGACGTA CGCTTCTTGG GGCCAATCCG CCAAAAGGCC AGCAGCTTGA AGACCACTAT TTCGGTTCTA TTCCCGACAG AGTTCTTGAA TTTATGAACG AGGTTGAAAA AGAGCTCTAT CTGCTTGGCA TTCCTGCAAA AACCCGCCAT AACGAGGTTG CTCCTCACCA GTTTGAGATA GCGCCTATTT TCGAGAGAGC AAATATCGCG GCAGATCACA ATCTGCTGGT TATGGAGATC ATGCGAAGGG TTGCCGAGAA GAAAGGATTC GCACTCCTTA TACACGAAAA GCCATTTGGA GGCATCAACG GTTCCGGAAA ACACAACAAC TGGTCAATCG GTACTGCTGA AGGTATCAAT CTTCTTGAGC CGGGTGATAC TCCTGAGTCG AATATTCAGT TTTTGGTATT TCTCGTTGCC GTTCTCAAAG GCGTGTACAA GCGTTCTGCT ATCCTGAGGG CTGCTATTGC CAGTATCGGC AACGATCATC GTCTTGGCGC AAATGAAGCT CCACCAGCCG TTGTCACTGT TTTCCTCGGT GAACTGCTGG AGAAGGTGCT CGATGCAATC GAAAGCGGCA AGGTTGATTT TACTACCGAG AAACAGATTC TTGACCTTGG GCTCGCTCAT ATGCCTGTTC TCAACAAGGA TTATACGGAT CGTAACCGTA CCTCTCCTTT CGCGTTTACC GGCAACAAGT TCGAGTTCCG CGCTGTCGGT TCGTCACAGC CTATCTCGAC ACCGAACATG GTACTCAATA CCCTGATGGC GGAAGCTATT GACGGTATTT CCGAAGAGAT CCAGTCTAAA ATCGATGCTG GTATCGAAAG AGACGCGGCT ATTCTTGAGG TGATTCGTGC TGAAATTGCT GCAACAAAGG CTGTTCGCTA CCAGGGAGAC AACTACAGCG ACAATCTTCA GGATGCAGCT GCAGAGCGCG GTCTGCCGAA CATGAAAAAT ACACCGCAGT CCCTGAGGGC GCTTCTTGAG GAGGATAACA AGAAAATGTT TGCCTCTTAC AGTGTTCTTT CAAACGAGGA ACTTAATTCG AGGTTGAATA CCCGTCTCGA ACGCTATATC AAGGGAATCG ATATCGAAGC CCGTACGTTA CAGCTTATGC TCAAAACCTT TGTTATTCCT GACGTTTCTG AATATCAGGG TGAAATCGCA TCATCGTTCA ACGGACTTAT TGAAGCTGCT TCACGTATCG GCATCTCAGA CAAAACATTG AAGAGTCAGG GTGATCATCT GAAAGCTCTT GCCGAAAATC TTTCTGTTCT TATTGATCTG ACCGAAGAAC TCGATGCTGT TATTGTCAAA CTCGGTGATA TCGAAGAGGA GTTTGACGCG GCTGACTACT GTGCGGACGT TGTGCTTCCT GCCATGAACA AAGTGCGTGA TGTCGCTGAT CTTCTTGAAC TGATGGTGGA TCGCAGCAAA TGGCAGCTGC CTACCTATTC CGAAATGCTT TTCGAGCACT AA
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Protein sequence | MDNNSTTAVS TYFGSMTFDQ AAMRKKLPKE VYRALLKTIE AGNKLSEDIS AVVAHGMKEW AMEQGATHYT HWFQPMTGST AEKHDAFLSI DGDGTPIERF SGGQLIQGEP DASSFPSGGM RTTFEARGYT AWDPSSPAFL MKGGNGLTLC IPTVFISYHG EALDEKTPLL RSMDAVSKSA VRLLDILGTE SSRVNTYAGA EQEYFLIDRK FYTMRPDLVM TGRTLLGANP PKGQQLEDHY FGSIPDRVLE FMNEVEKELY LLGIPAKTRH NEVAPHQFEI APIFERANIA ADHNLLVMEI MRRVAEKKGF ALLIHEKPFG GINGSGKHNN WSIGTAEGIN LLEPGDTPES NIQFLVFLVA VLKGVYKRSA ILRAAIASIG NDHRLGANEA PPAVVTVFLG ELLEKVLDAI ESGKVDFTTE KQILDLGLAH MPVLNKDYTD RNRTSPFAFT GNKFEFRAVG SSQPISTPNM VLNTLMAEAI DGISEEIQSK IDAGIERDAA ILEVIRAEIA ATKAVRYQGD NYSDNLQDAA AERGLPNMKN TPQSLRALLE EDNKKMFASY SVLSNEELNS RLNTRLERYI KGIDIEARTL QLMLKTFVIP DVSEYQGEIA SSFNGLIEAA SRIGISDKTL KSQGDHLKAL AENLSVLIDL TEELDAVIVK LGDIEEEFDA ADYCADVVLP AMNKVRDVAD LLELMVDRSK WQLPTYSEML FEH
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