Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0889 |
Symbol | |
ID | 6374556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 961533 |
End bp | 962105 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683391 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_001959315 |
Protein GI | 189499845 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000492608 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGG AGAAACGACT CACATCGGTC AGTGATGCGG CAGCATTTCT TGCCGGGGAA GAAGAGGTGA AAAAACAGGT TGAGACGGAA ATAGAGAACA GTCAGATTGT CAGTAACATG CTGCAGATGA GGGTATGCAA AGGTGTGACG CAGAAGGAAC TGGCACGTCG AATGGGGTGT GATCCGAGCA AAATATCCAG GATGGAGGCA GGTAACGACT TGCAGCTTAA AATGGGGGAC GTCATACAGT ATCTGTCAGT TTTGGATGTG TCCATCTCTT TGCTTTTCGA AGATACATCA CTGCCTGCCG CGGGACAGAT CAAGCAACAT GTGTATGCTA TTCAGGAGCA ACTTGAAAAG CTTGTGAAAA TTGCCCGCCA GGTTGACGGC GACGAGGAGA TTATCACTAA GATCCATGCG TTCTGTGGGG AAGTATTGTT CGGTTTCCTG AAGAAATTCG GGGACAGCTA TGATCAGCTT TGCCAGGTAT CCGGTCGTAT GACTCGTATG ACGCCGTTGT TGAAAGGACA AAAAAGTGGC GCAGTTGATT GTGAAAAATC ACTGTACTGC TGA
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Protein sequence | MDKEKRLTSV SDAAAFLAGE EEVKKQVETE IENSQIVSNM LQMRVCKGVT QKELARRMGC DPSKISRMEA GNDLQLKMGD VIQYLSVLDV SISLLFEDTS LPAAGQIKQH VYAIQEQLEK LVKIARQVDG DEEIITKIHA FCGEVLFGFL KKFGDSYDQL CQVSGRMTRM TPLLKGQKSG AVDCEKSLYC
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