Gene Cphamn1_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0889 
Symbol 
ID6374556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp961533 
End bp962105 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content48% 
IMG OID642683391 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001959315 
Protein GI189499845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000492608 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGG AGAAACGACT CACATCGGTC AGTGATGCGG CAGCATTTCT TGCCGGGGAA 
GAAGAGGTGA AAAAACAGGT TGAGACGGAA ATAGAGAACA GTCAGATTGT CAGTAACATG
CTGCAGATGA GGGTATGCAA AGGTGTGACG CAGAAGGAAC TGGCACGTCG AATGGGGTGT
GATCCGAGCA AAATATCCAG GATGGAGGCA GGTAACGACT TGCAGCTTAA AATGGGGGAC
GTCATACAGT ATCTGTCAGT TTTGGATGTG TCCATCTCTT TGCTTTTCGA AGATACATCA
CTGCCTGCCG CGGGACAGAT CAAGCAACAT GTGTATGCTA TTCAGGAGCA ACTTGAAAAG
CTTGTGAAAA TTGCCCGCCA GGTTGACGGC GACGAGGAGA TTATCACTAA GATCCATGCG
TTCTGTGGGG AAGTATTGTT CGGTTTCCTG AAGAAATTCG GGGACAGCTA TGATCAGCTT
TGCCAGGTAT CCGGTCGTAT GACTCGTATG ACGCCGTTGT TGAAAGGACA AAAAAGTGGC
GCAGTTGATT GTGAAAAATC ACTGTACTGC TGA
 
Protein sequence
MDKEKRLTSV SDAAAFLAGE EEVKKQVETE IENSQIVSNM LQMRVCKGVT QKELARRMGC 
DPSKISRMEA GNDLQLKMGD VIQYLSVLDV SISLLFEDTS LPAAGQIKQH VYAIQEQLEK
LVKIARQVDG DEEIITKIHA FCGEVLFGFL KKFGDSYDQL CQVSGRMTRM TPLLKGQKSG
AVDCEKSLYC