7 homologs were found in PanDaTox collection
for query gene Cphamn1_0889 on replicon NC_010831
Organism: Chlorobium phaeobacteroides BS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010831  Cphamn1_0889  transcriptional regulator, XRE family  100 
 
 
190 aa  388  1e-107  Chlorobium phaeobacteroides BS1  Bacteria  decreased coverage  0.00000492608  normal 
 
 
-
 
NC_010803  Clim_0998  transcriptional regulator, XRE family  67.22 
 
 
195 aa  238  5e-62  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1260  XRE family transcriptional regulator  64.78 
 
 
187 aa  219  1.9999999999999999e-56  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.218482  n/a   
 
 
-
 
NC_013421  Pecwa_0549  transcriptional regulator, XRE family  30.3 
 
 
103 aa  45.1  0.0006  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0658  XRE family transcriptional regulator  44.68 
 
 
95 aa  43.1  0.003  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_04053  Transcriptional Regulator, XRE family protein  32.22 
 
 
106 aa  42.7  0.003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2529  transcriptional regulator, XRE family  33.33 
 
 
93 aa  41.6  0.008  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000784971  n/a   
 
 
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