Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0850 |
Symbol | |
ID | 6374517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 916486 |
End bp | 917226 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683358 |
Product | hypothetical protein |
Protein accession | YP_001959282 |
Protein GI | 189499812 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00832469 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAAC TGTTCTGCAC TGCGCTGATG ACCCTTATGT TTTGCAGCCT CTACCCGTTT ACTGCATCAG CAAGGTTCAC CGGAATTATT GACATGAACC TGACTATGCC CAACGGCAAA TCCGGGGTAA CCTATTTTTT TGGCTCTGAT GAGCAGCGGA TGGATATGAC GACACAACTG GATAAAATCC CGGACCCGCT GAAAACAACC GTAATCACTC GCGCATCAGA CCCTGATCAG GCCACCATAC TCAACCATAA AGCAGCCACC TATACAAAAG TGAATCTTAA AACCGCTGCA GAAAACGCGA CACTTGTCGA TTTCGACAGC GACTACAGAA TAGAAAAAGC GGGAAAAGAA ACGATTAAAG GCTACAGTTG CCGGCATGTC AAGCTGTTCA GCGCCACAGA CACCATAGAG ATGTGGCTTA CCAGGGATAT TGGTGATTTT GAAACCTTCA GGCTGCTGCA GTCACAAAAT CCGCGTCTTT CCAATACGGT TCTTGCCAAA AAGCTCTCCG ATGAAGGGCT GGACGGCTTT CCTGTCAGGA TCATTCAGAA AAATGAAGCC GGCACGCTTG CCATGGAAGT CATCTCGGTA ACACCGATGC CCGTCAAACC GTCCGAGTTC AGCATACCTC AGGGATATAC CGAGATCGCC GACCCGCAGC AGCCGCTGAA CCAACAACAG AAACAGCACC TGAAAGACCT CATGGAAAAA ATCAAAAATT TCAACGAGTA G
|
Protein sequence | MNKLFCTALM TLMFCSLYPF TASARFTGII DMNLTMPNGK SGVTYFFGSD EQRMDMTTQL DKIPDPLKTT VITRASDPDQ ATILNHKAAT YTKVNLKTAA ENATLVDFDS DYRIEKAGKE TIKGYSCRHV KLFSATDTIE MWLTRDIGDF ETFRLLQSQN PRLSNTVLAK KLSDEGLDGF PVRIIQKNEA GTLAMEVISV TPMPVKPSEF SIPQGYTEIA DPQQPLNQQQ KQHLKDLMEK IKNFNE
|
| |