Gene Cphamn1_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0516 
Symbol 
ID6374180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp542574 
End bp543305 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID642683033 
ProductDNA alkylation repair enzyme 
Protein accessionYP_001958960 
Protein GI189499490 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATGG TAGCCGACAT ACAACTAAAA CTCCGGCAGC TTGCCGACCC TGCCATCGCC 
CGTCACTCCC TGAGATTTTT CAAAACCGGC AGGGGCGAAT ACGGGGAAGG AGACCGGTTT
CTCGGCATCC GTGTGCCCGT GTTGAGAAAG CATATCCGTG AGTTTATGGA TGCTTCACTG
GAGGATATTC AGGAACTCCT CACATCGGAT TTTCACGAAG AACGCCTGTT TGCTCTGCTG
CTTCTCGTCC GGAAATTCGA AAAGGGGGAT GAGGCGCAAC AGAACGACGT CTATGACCTC
TATTTCAGGA ACCGCTCATC GGTAAACAAC TGGGATCTTG TGGACAGTTC AGCACCATAT
ATCGTCGGAG CCTGGCTTGA AAAGCGTGAT CCGTCGCCTC TCTACAACCT TGCAAGGTCA
GACAGTCTCT GGGACAGAAG GATAGCTATT GTCGCCACGT TTCATTGTAT CAGGAAAGGC
AGCTTCGATG ACGCCCTGCG GATTTCGCGT CTGCTCATAC AGGATCGCGA GGATCTCATA
CACAAAGCGG TGGGGTGGAT GCTCAGGGAG ATCGGAAAAA GGGATATCGA AGCCGAGAAG
GCGTTTCTCA GGCAGCATCT GCTGGAAATG CCCCGTACGA TGCTTCGTTA TGCCATCGAG
AAATTCCCGG AACACGAAAG AAAACGATAT CTTGTCTGCA TAAGCGAAGA GGAAATTTCA
GATTTGAGGT AG
 
Protein sequence
MLMVADIQLK LRQLADPAIA RHSLRFFKTG RGEYGEGDRF LGIRVPVLRK HIREFMDASL 
EDIQELLTSD FHEERLFALL LLVRKFEKGD EAQQNDVYDL YFRNRSSVNN WDLVDSSAPY
IVGAWLEKRD PSPLYNLARS DSLWDRRIAI VATFHCIRKG SFDDALRISR LLIQDREDLI
HKAVGWMLRE IGKRDIEAEK AFLRQHLLEM PRTMLRYAIE KFPEHERKRY LVCISEEEIS
DLR