Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0516 |
Symbol | |
ID | 6374180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 542574 |
End bp | 543305 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683033 |
Product | DNA alkylation repair enzyme |
Protein accession | YP_001958960 |
Protein GI | 189499490 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATGG TAGCCGACAT ACAACTAAAA CTCCGGCAGC TTGCCGACCC TGCCATCGCC CGTCACTCCC TGAGATTTTT CAAAACCGGC AGGGGCGAAT ACGGGGAAGG AGACCGGTTT CTCGGCATCC GTGTGCCCGT GTTGAGAAAG CATATCCGTG AGTTTATGGA TGCTTCACTG GAGGATATTC AGGAACTCCT CACATCGGAT TTTCACGAAG AACGCCTGTT TGCTCTGCTG CTTCTCGTCC GGAAATTCGA AAAGGGGGAT GAGGCGCAAC AGAACGACGT CTATGACCTC TATTTCAGGA ACCGCTCATC GGTAAACAAC TGGGATCTTG TGGACAGTTC AGCACCATAT ATCGTCGGAG CCTGGCTTGA AAAGCGTGAT CCGTCGCCTC TCTACAACCT TGCAAGGTCA GACAGTCTCT GGGACAGAAG GATAGCTATT GTCGCCACGT TTCATTGTAT CAGGAAAGGC AGCTTCGATG ACGCCCTGCG GATTTCGCGT CTGCTCATAC AGGATCGCGA GGATCTCATA CACAAAGCGG TGGGGTGGAT GCTCAGGGAG ATCGGAAAAA GGGATATCGA AGCCGAGAAG GCGTTTCTCA GGCAGCATCT GCTGGAAATG CCCCGTACGA TGCTTCGTTA TGCCATCGAG AAATTCCCGG AACACGAAAG AAAACGATAT CTTGTCTGCA TAAGCGAAGA GGAAATTTCA GATTTGAGGT AG
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Protein sequence | MLMVADIQLK LRQLADPAIA RHSLRFFKTG RGEYGEGDRF LGIRVPVLRK HIREFMDASL EDIQELLTSD FHEERLFALL LLVRKFEKGD EAQQNDVYDL YFRNRSSVNN WDLVDSSAPY IVGAWLEKRD PSPLYNLARS DSLWDRRIAI VATFHCIRKG SFDDALRISR LLIQDREDLI HKAVGWMLRE IGKRDIEAEK AFLRQHLLEM PRTMLRYAIE KFPEHERKRY LVCISEEEIS DLR
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