Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0515 |
Symbol | |
ID | 6374179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 540734 |
End bp | 542545 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683032 |
Product | Radical SAM domain protein |
Protein accession | YP_001958959 |
Protein GI | 189499489 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATATT TCAATCATGT TTCTCTTGTT GAAGCACCCC AGTCCGCCTG TGTACCCTTT CCCCAGTACA TTTCGGATAT TATCGGCATC TGCTATCTCG CCGCTGCGGT CAAAAACGAT GTTGAAACCC TTTCTATTCC AGAGAACTAC TATAATGCCG GTATTTTTAC AAGTTTCGAG AGGTTGTTGA AAAAACAGCC GGCAGAAATA GTCGGTATTT CTTCGATGAC CGGAGCTTTC AGCAATGCAG TCAGGCTCGC TGAAATCGCC AGGAAACACG GCGCTTTCGT TGTCATGGGA GGATTTCATC CTACCGCTCT GCCGGAAGAG GTGCTCAAAC TCTCCTGTAT CGATGCTGTC GTTATTGGCG AGGGGGAAGA AACATTTCGT GACCTGGTAC TCCATGGTCC GGGTCGTGAG GTTAAGGGGC TTGTCTTCAG GGAAAACGGA GGAATCGTTT ATTCGGCCCC CCGGGAGATT ATCCGCGATA TCGATGCTCT TTCCTTTCCG CTTCGTTCTC TCAGACCGGA TCGTTACGAA GAAAAGGGTA CAGACTACTC GATAGATACC ATCCATACTT CGCGGGGCTG TCCCTGGGTC TGCTCGTTCT GCGCAAACGA TCAGGTTCAC AAGCAGTGGC GGGGAAGAAG CGCTGAAAGC GTCGTCGATG AATTTGCCGA ACTGCACAGT ACGGTCATAA AGAAACGCAT CAAGATCTGG GATGCGAATT TTCTCACCAG TATCGGAAGG GTGGAACGAA TCTGCGATAT GATGATTGAA CGGGGGTTGA CCAACTTCCG GATTACGACA GAGACCAGAG CGAAAGACCT CATCAGGGGG GAAAGGATTC TGGAAAAACT AAGCAAGATC GGTCTCAACA AGGTCGGGCT CGGTATCGAA AGCCCGAATG CGGGAACCCT TCAGCTGCTG AACAAGAAAA ATGATCTCGA TCTTGTTTCG ACAGCTGTGG CTCTTGCTGG GCGTCATGGG ATAGGAACCG AGGGGTATTT TATCATCGGC CACAACCATG AGAGCGAGGA GGACACGATG GCCTACCCGG AATTCGCCAA GACTCTCGGT CTTCCTCAAT CGGTTTTTAT GGTCATGACT CCCTATCCGG GGACGAAGGT CTTTGAGGAA TACAGGCGGG AAAACAGGGT CAAATCGTTC GACTGGGATC GTTTTAATAA TTTCATTCCG GTGATCGAGA CGGAAAGGAT GGGTTCTTCG GACATTTCAT CGATGATGGT TTATTGCGAT ATCGCGTTCG CTACCCTCGA CTCGATGCTC CGGAGAAACC GGGAGCGTGA TGTTCTTCTC GTGCTCCTGA AGGATATTTT CAGGAACGTA TTGATACTTG GAGGAAACAA GGTGCTCGAC GCCGATGAGA TCAGTGAGAT CGTGTTCAAC GCGTTTCTTC GTTTTGCCGG AAAGGCAGGC GGCGTTGTCG TTGAGAAAAC ACTGCCTCCA TCCGTTGCAC CGCTTCGGGA GCCGTGTGTC GTGACACTGC GCGCTTCTGA CGGCAAGAGT ATCGATATTA CTCTGCGGCA GCGTGAAGAC CGGCGCGAGG TAACCATGTT CGCGATGAGC GGTCGCAAGA CAACGGGCAG ACATCCTGTG ATAGATCTCG ACATACTGAT CCGCTTTGTC AGCTCCCTGA AGGGCGACAT GCTGATGGAA ATTCTCTACA GGTTTGAACT GCTTCGTTAC AATCCGGGCA AACGGTATGC TGTATTTTTT TCTCTTCTCA GAAAACCGGA AATGGTGTTC CAGGCAGGGA AAATGGCTGC CTTGTTCGCC CGGTCACTTT AA
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Protein sequence | MAYFNHVSLV EAPQSACVPF PQYISDIIGI CYLAAAVKND VETLSIPENY YNAGIFTSFE RLLKKQPAEI VGISSMTGAF SNAVRLAEIA RKHGAFVVMG GFHPTALPEE VLKLSCIDAV VIGEGEETFR DLVLHGPGRE VKGLVFRENG GIVYSAPREI IRDIDALSFP LRSLRPDRYE EKGTDYSIDT IHTSRGCPWV CSFCANDQVH KQWRGRSAES VVDEFAELHS TVIKKRIKIW DANFLTSIGR VERICDMMIE RGLTNFRITT ETRAKDLIRG ERILEKLSKI GLNKVGLGIE SPNAGTLQLL NKKNDLDLVS TAVALAGRHG IGTEGYFIIG HNHESEEDTM AYPEFAKTLG LPQSVFMVMT PYPGTKVFEE YRRENRVKSF DWDRFNNFIP VIETERMGSS DISSMMVYCD IAFATLDSML RRNRERDVLL VLLKDIFRNV LILGGNKVLD ADEISEIVFN AFLRFAGKAG GVVVEKTLPP SVAPLREPCV VTLRASDGKS IDITLRQRED RREVTMFAMS GRKTTGRHPV IDLDILIRFV SSLKGDMLME ILYRFELLRY NPGKRYAVFF SLLRKPEMVF QAGKMAALFA RSL
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