Gene Cphamn1_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0479 
Symbol 
ID6374143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp503502 
End bp503981 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID642682997 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_001958924 
Protein GI189499454 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAGCG TCCCCCTTCT GATTACCAAC GAGATGCTGA AAGACAAGCC CTGTTGCGAA 
GAGGTGATGC TTGAGTTTTC AGGGTTTATC GCCGATCATA ACATCGTCGC GCACAATGCG
TCATTCGACA GGCGTTTTCT GGATTCCGAG CTGAAACGGG CGAACCGGAA ATATGAAGGC
TCCTGTTGCT GCTCTCTGCT CCTTTCAAGA AGGGTGTATC AGGATTCGCC GAATCATACG
TTACAGACAC TGGTGTCTCA TGCGGGTATC CCGGAGACCG GAACGTTTCA CCGCGCGCTG
GCAGATGCCG AGATGACCGC GTATTTGTGG CTGTCGATGA TTGATCGTAT TCGTCGTCAA
TACGGGATAC CGGAGATTTC CTTTGACCAG TTGCGTGAAC TCTCAAGAGT CGACAAGCTC
TACGCCCATC GATACCTTTG CGCTCTGGCA GAGGAACCCT GGAATAACGT TAAAACGTGA
 
Protein sequence
MNSVPLLITN EMLKDKPCCE EVMLEFSGFI ADHNIVAHNA SFDRRFLDSE LKRANRKYEG 
SCCCSLLLSR RVYQDSPNHT LQTLVSHAGI PETGTFHRAL ADAEMTAYLW LSMIDRIRRQ
YGIPEISFDQ LRELSRVDKL YAHRYLCALA EEPWNNVKT