Gene Cphamn1_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0469 
Symbol 
ID6374133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp491429 
End bp492325 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content51% 
IMG OID642682987 
ProductAuxin Efflux Carrier 
Protein accessionYP_001958914 
Protein GI189499444 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAATC TTCTGCTTCT TATCGTTTGT TTTACCGCCG GGGTCATGTT GCGGCGTTTC 
GGTAACATGC CTGAAAGTAC ACCCCGGGTG CTCAACGGTT TTATTATTCA TGTTTCTCTT
CCGGCAATCA CGCTCTTGTC GATCCATGAA CTCACCATTT CCTCGGATAT GCTGTTTATG
GCGGCTATGC CCTGGATTCA CTTTGGCCTT GGGGCAGGTT TTTTTCTCCT GCTGGGCAGG
CTTTTTACGT TGCCGCGAAC AACTGTCGGG GCTCTGATGC TGACCGGCAG TCTCGGCAAT
ACTTCCTTTG TGGGTTTGCC TATGATCGAG GCATTTTATG GCAAGGAGGC TCTGGTGAAC
GGGATCGTTG TCGATCAGCT TGGTTCGTTC ATGGTGCTCT CGACGCTGGG GATTATTGTT
GCCGGAATCT ATTCTGACGG GTTGCCTTCA GCACAGGACA TCCTGAAGCG GATTGTTTTT
TTTCCTCCCT TTATCGCGCT CGTGATTGCT CTTCTACTGC TTCCCCTGGA GTATCCTGCA
TGGCTGACTC CGGTGTTACA GCGTCTGGGC GACACGCTTG CGCCACTTGC CCTGTTTTCC
GTTGGATGCC AGCTGAATAC TGGCCATTTC GGGGGTAATG TGGGCAATCT TGCTTTGGGT
CTCGGGTTTA AACTGTTGCT CGCTCCTCTT GTACTTTTTC TGTTGTATGT CAAGGTTTTC
AACCTCGACG GACTGCCGAT TACCGTAACG CTTTTTGAGG CGGCTATGCC GCCTATGATC
ACAGCAGGCA TCATAGCGAC GGAACACGGC ATCAATCCTC CGCTGGCAAA TCTTATGGTT
GCTGTGGGTA TTGTGCTGGC CTTTTTTACG TTGCCCCTCT GGTGGATGGT ACTGTGA
 
Protein sequence
MHNLLLLIVC FTAGVMLRRF GNMPESTPRV LNGFIIHVSL PAITLLSIHE LTISSDMLFM 
AAMPWIHFGL GAGFFLLLGR LFTLPRTTVG ALMLTGSLGN TSFVGLPMIE AFYGKEALVN
GIVVDQLGSF MVLSTLGIIV AGIYSDGLPS AQDILKRIVF FPPFIALVIA LLLLPLEYPA
WLTPVLQRLG DTLAPLALFS VGCQLNTGHF GGNVGNLALG LGFKLLLAPL VLFLLYVKVF
NLDGLPITVT LFEAAMPPMI TAGIIATEHG INPPLANLMV AVGIVLAFFT LPLWWMVL