| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0463 |
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| Symbol | |
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| ID | 6374127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 485677 |
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| End bp | 487731 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642682981 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001958908 |
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| Protein GI | 189499438 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAA AGCAGGCTGT TGCAGAGATC ATAAGGTTGC GTGAGGAGAT CGATCGTCAC
AACTACCGCT ACTATGTTCT TGCCAGGCCG GAGATTTCAG ATTTTCAGTA CGACGCCATG
CTTGAAAAGC TGGTCGCGCT GGAAGGGGAG TTTCCGGAAC TGAAAACCTC TGACAGCCCC
AGCCAGCGGG TGGGCGGCGG CATCACCAAA GAGTTTCCGA CGGTCGAGCA CCGTGAGCCG
ATGTTGAGCC TTTCCAATAC CTACTCGATC GAGGAGGTGG GAGAGTTTTA TCACAGAGTA
GTGAAACTGC TTCCGGAAGA GCACCGTGAC AGCCCTGAAT TTGTTGCCGA GCTCAAATTC
GACGGTGTTG CGGTAAGTCT TCTTTATCGT GACGGCCTCC TTGTTCGCGG GGCGACAAGG
GGAGACGGCT CGCAGGGGGA CGATATCACA GGGAATATCC GCACCATCAG GTCGGTTCCC
TTGCGTCTTG GAAATCCTTC AGGTTCCGGA GAGGGTGTGG AGCGCTATGA GGGAAGAGAG
ATCGAGGTAC GGGGAGAGGT GTTCATGACA AAAACCGATT TTGCCGTTCT CAATGAAGGA
CGCCCTGAAG AGGAACGGTT TGCAAATCCG AGGAATGCAA CCGCCGGGAC ATTGAAACTG
CAGGATTCAG GGGAAGTATC ACGCAGGAAA ATGGTTTTTG TCGCCTACTA CCTGAAAGAG
AGTTCTGCAG AAATAATCAG CCATGCCGAA CGTCTTGAGC TGCTTGAACG TCTGGGTTTT
TACACCGGAG GTGAACACCG TGTATGCCGG ACGCTGAAAG ATATTCGCGA ATATATTGAC
GGGTGGCAGA AGAAGCGTCT GACTGGACTG CCGTATGAAA TTGACGGCAT TGTTCTCAAG
CTGAACAATA CGGCGCTCCG GGATGAACTT GGAGCCACCT CGAAAAGTCC CAGGTGGGCA
ATAGCGTACA AGTTCCCCGC CGAGAGGGCG CGTACGGTTA TCCGAAGCAT TGTTTTTCAG
GTCGGGAGGC TCGGCACCAT CACTCCGGTC GCCGAGCTTG AACCTGTCCG GCTTGCAGGA
ACGACGGTTT CCCGCTCGAC GCTGCATAAT CTTGAAGAGG TGGAACGTCT CGATGTCCGG
CTGCATGATA CGGTCGTTAT CGAAAAGTCC GGCGAGATTA TTCCGAAGGT TATCAGCGTC
GTCGAGGAAA AACGCCGGCC GGGCACCCTG CCCGTTGTTG TTCCCGAGAG CTGTCCTTCC
TGCGGAACTC CTCTCGTCAA ACCTCCAAAC GAAGTGCACT ATTACTGCCC GAACAGCGAG
GGATGCCCGG CTCAGACGAA GGCGCGCATT GAGCACTTCG CGTCACGTAA TGCCATGGAT
ATCAACGGTC TGGGCAAGGC GATTGTCGAG CAGCTTGTCA GCAGCGGAAT GGTTGTCGAT
GCGGGCGATC TCTATCGTCT GACTCCCGAT CTGATCATGC GTCTCGACCG GCAGGCTGAA
AAGTCGGCAG GCAACCTGGT CAATGCTATT GCAAAGAGCA GAAACCGTGA GTACTTCCGT
GTTTTGTTCG CCCTTGGTAT ACGTCATGTC GGTATCGCTA CGGCACGCGA ACTTGCAGGG
GCCTATCCTA CGCTTGACAT GCTTTGCAAA GCATCTGTCG AAGCGCTCTC GGATGTTACT
GATGTCGGGC CTGTTATTGC TGAAAGCGTT CACGCGTTTT TCAGGAAGCC GTCCGCGACG
GCAATGATCG AAAAACTCAG AGAGGCCGGA GTGCGGCTGG AGGCTGAAAA GACAAAGAAG
CCGGTCAATC TCAATTTTGA CGGTATGAAA GTGATCTTTA CCGGGGCTCT GGAGCGGTAT
ACCCGTGATG AAGCGGCAGG GCTTGTACGT GAAAGAGGAG GGAAAACGGT TGCTTCGGTG
AGTAAAAATA CGAATCTCGT TGTTTATGGT AAAGAGCCGG GCAGCAAACT GGAAAAGGCG
CGAAAACTTG GTGTCAGGGT GATTACCGAA AGCGAGTTTG AAGAGATGCT GGGAGAAGTG
GGAAGTAACG AGTGA
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| Protein sequence | MDKKQAVAEI IRLREEIDRH NYRYYVLARP EISDFQYDAM LEKLVALEGE FPELKTSDSP
SQRVGGGITK EFPTVEHREP MLSLSNTYSI EEVGEFYHRV VKLLPEEHRD SPEFVAELKF
DGVAVSLLYR DGLLVRGATR GDGSQGDDIT GNIRTIRSVP LRLGNPSGSG EGVERYEGRE
IEVRGEVFMT KTDFAVLNEG RPEEERFANP RNATAGTLKL QDSGEVSRRK MVFVAYYLKE
SSAEIISHAE RLELLERLGF YTGGEHRVCR TLKDIREYID GWQKKRLTGL PYEIDGIVLK
LNNTALRDEL GATSKSPRWA IAYKFPAERA RTVIRSIVFQ VGRLGTITPV AELEPVRLAG
TTVSRSTLHN LEEVERLDVR LHDTVVIEKS GEIIPKVISV VEEKRRPGTL PVVVPESCPS
CGTPLVKPPN EVHYYCPNSE GCPAQTKARI EHFASRNAMD INGLGKAIVE QLVSSGMVVD
AGDLYRLTPD LIMRLDRQAE KSAGNLVNAI AKSRNREYFR VLFALGIRHV GIATARELAG
AYPTLDMLCK ASVEALSDVT DVGPVIAESV HAFFRKPSAT AMIEKLREAG VRLEAEKTKK
PVNLNFDGMK VIFTGALERY TRDEAAGLVR ERGGKTVASV SKNTNLVVYG KEPGSKLEKA
RKLGVRVITE SEFEEMLGEV GSNE
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