Gene Cphamn1_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0367 
Symbol 
ID6374029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp383584 
End bp388068 
Gene Length4485 bp 
Protein Length1494 aa 
Translation table11 
GC content48% 
IMG OID642682886 
Producthypothetical protein 
Protein accessionYP_001958815 
Protein GI189499345 
COG category[S] Function unknown 
COG ID[COG2911] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0811995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAGAG TAAAAAAATA CATTCTCGGC ATTGCAGTCA GCATATCCGC GCTGATCCTT 
ATTCTTGCGG TCATTGTTGC CATCATCCTC AACAGTGGCT CCCTGGATCT CATGGCAAAA
AATCGTCTTA TCGATTTTTT TAACAGCGAG TTCCAGGGAA AGCTCAACAT TGAAGAAGTC
AACCTGCAGT TCCCTTCAAC AATCATCCTG CACCAGACAC AACTGTATCG CGAAAACAGT
GAAACACCGG AATTTACCGC AGAGAAGGTT ACACTCAACC TGAATTTTCT GCGGCTGCTG
TCAAATTTTT CCTCGATCAC CATACGCTCT CTCAAAGCCG ATTCATTTTT TATTCATCTC
GAACGCTATC CCGACGGCTC CACCAATATC GAGCGTATTT TCGCCCCCAG AAAAGAACAA
GACCCTGATG CACCCGGGCT TGAACGGTTT CTGTGCAACA GAATAGATCT TACCAACGGA
TCAGCCGAAT ACCTCGACTT CCAGAATAAA GAGGCTGACC CGGAACTGCT CACTATTGCA
GACATTTCGT TTACGGGTAA TAAACTGCGT TATTCCCCGG AAAATTTCAG CGGTATCATC
CGCAACATCG GATTTCAGCT TCCTCAAAAA AACTTTACAC TACGTAAAGG TTCGGCTAAA
CTCTCCGTTA CAAACAAACG TCTTGAAATT CTCGACCTCA AGGCAAAAAC AGGTAAAAGC
AGTGCTGAGC TGTCGCTGGG GCTCTATGAG TTCAATGTTT TCTCTCAGGA AAACCCGGAC
CGGCATTCAA GCAGCCCTGC GATGCTTAAC CTCAAAGCCG GCAGTATACA CACCGATGAG
CTCAGCATTT TTTTTCCCGA TCTCGCTCTT CCTCCGGGCA TCTATACTGC TTCAGGCAAA
GCTGAAGGGC AGCTCCGAAA AATAGATATC AGGAATGCGG TCATCGCACA TAAAAACTCC
CTGTTGCGGC TTCAGGGGGA GCTGCTCAAT CTCAATCAAC CGGATTTTTT AGGATTCCGT
CTTGAAACGG ACAGTTCGAG GATTTCAGGA GATTTTCTGC AGACCGCAAT CACGGACACA
ACCATAAAAA ACCTCGCTGA ACCGGCAGGA GATCTCATGA TTTCCGGATA TGGCCAGGGG
AATCTGAAGG AATTCTTTAC CGACCTATCC ATTGAAACAG AGAGCGGCGA TATGCTGCTT
TCACTGCAGG CGGACACTCC TGATGACGCT GAAACCGGCT ACAGCGGAAA ATTTACGCTA
CGGGACATTG CACTTCACCG TTTCCTGACT CAGGATTCAT CCTCAGTCAG CGGTATAAAC
TGCACAGGCT CATTTTCCGG AACGGGCATC TCTCCCCATC CGGCTGAAGC CTCTCTCTCC
ATCGATCTTC AGAATTCATA CTGGCAGGAA CAGATGCTTT CCGGAGGCAC GCTTGATCTG
AACTACCACG ACGATATTCT TTCCACCGAT GTCAAGATAG CCGGAGAAAG GATGAACGTC
GCCCTGAAAG GATCGATAGA CTGGACAAAG GCTGTGCCGG TATATGAAGG CAAAGGTTCA
GCAGTCAACC TTGATCTGTC AAAATTTCTT CGTTCAGACG GGATCAGTTC CAACCTGAAC
TTCTCCATGC TCTTCCGGGG AGAACATTTT GATCCGGAAA AGCTCAATGG AAATATCTCT
GCCCGCTTCA GCCCCTCCAC CATCAATGAT TACTCTCTGA AGGAGGGCTC GGAACTCTCT
CTACGCATCG TACAGAAATC TCCCACATCA AGCATTGTTC TGAAAAGCGA CTTTCTCGAT
TTCAACGCGG AAGGGCTCTA TACCTTCAGA GAGTTTCTTT CCGGCATACA ACTCACCGCC
AGTTCTGCCG CCAGAGAAGC CGCAAAAAAC AACATCTGGG CAGCCTCCCC GCCGCCCCCT
CCTTTTGCTG AAAACATTGA AAAAAACTTC TCGGCAGACT ATACACTCAC GGTAAGGGAT
ATTTCACCGT TGGCTGTTTT TCTTCCTGTG AAAGGCTACA AGCTATCCGG TAAGGCTACC
GGTAAATCCT ACAGATCAAA CGGTTCCTTC CATCTTACCT CATCAATCAG GATTGACAGG
CTAAGCAATG AACAAGGTTT TTCAATCGAC AATGCCACCC TGGGGGTCGA TGCGACCTAC
AACAGTGAAG GTATCGTCAG CGCATCAATC GACGCTGATG CCTCTGCATT GGATGCCGAA
AAACAGAGCA TCGAACAACT CTCGCTTACA GCCGCTTATG ACAAATCCGG ATTACAGGCC
GGCCTGCGTT TACGCATACC TGAAATAGAA CGATCGCTGA CAACCGACAT AAGAGCCGCC
CGCAGCAACA GACTCTATAC GATAAGGATC AGTGACCTCT CGATAACAGG AGGTGACGGG
GCCTGGAGCC TCAATAAAGA TTCCAGGATT GATATAGGCA GAAACTTTAC ACGCTTCTAC
GACCTTACGC TGCGCAAGGA TAAACAGGTT ATCAGCTGCG ACGGTCTGCT CAGCAATGAA
GTGAGCGGCC TTTTCGCATG CAGCATAGAG AACCTCGATA TGCAGGAACT CGGCATATTC
TTTCCTGAGT CCGGCATGCA GGGATCGCTC TCCTCCACCC TTCGCGTCAG TGGCTCTCCG
GGCGCCAAAA CCGCCACGCT GAAAATTACC GGACGTGAAC TTGTCTACGA TGATGTGATC
ATAGGAAATC TGAATCTTTC AGCTCTCCAT AACGGGGAAC GGTTACGGAC GGATTTTTCT
ACGGGCAGCA ACTTGCAGGG ACCACTCAAT GATATTACAG GAACCGCTTC CATACCGCTG
AAAGTCAACT GGTTTCCATT GAAGTATTCC ATTCCCGACA ACAAACCTGT CTCCGCGTCA
GCATCAGCTG ATCATTTATC CGCAGAAATT CTCGAGGTGT TCCTGCCTTT CTTCGAAACA
GCGGAAGGCA CCATTCCCGC CAAGCTTGTG GTCAAAGGAA AAACACCCGA CCCGGAGATC
TATTTCAGTA CAGAACTTAA AGACACTGAA ATTACCGTTA CCCCGACTGA AACCGTCTAC
CTCCTTTCCG GATCGATCGT TATCACCCCG AAAAAAGCTG ATTTCAGAGA CATACAGATA
AAAGACGTAC GTGGCGGCAC CGGCAGAATA AACGGATCTG CAACTCTTGA AAACCTGGAA
GCAAGCACTA TCGATCTCAC CGCATCCTTT GAAAATCTCC TGCTTTTCAA CAAACAGGAT
AAAAAAGACG AAACCTCTTT TGGAACCATA ACCGGTACGT CGGACAGGAT TCGTTATTAC
GGCGACACCG CCCAACCGGT CCTTACCGGA AATCTTCTGA TCACCAATGC GGACTTCACG
CTCTACAGAA CAGGCTCCAA TGAAAGCACA AAATACGTAG GCGCCGAACG ATTTATCACA
TTCGTGCCGC GATATCCTGA AAAGATCGAC CCTGACCAGC CTGAAAATCC CGAGAAACCG
GTTAATCCTG AATTTTACTA TACCCTTATT GATATCATTA CGATAAAGAA CCTGCGACTC
ACCAGCGCAG TCCCTCTGCA ATACAGCATG ATATTTGACA GAACGCGAGG AGAAAAGCTT
GAAGCCACGC TTCAGAACCT CTCGCTCAAT GTCAATAAAA ACCAGCAGAA TTACCGTTTG
TTCGGCGCCG TGAATATTTC TTCAGGAACC TACAGATTTT CCAACAGCAA TTTCGACCTT
GAGGACGGCG GAAGGATTGT CTGGAACAAC GTAGAAATCA GAGACGGCGT CATGCTAAAT
CTTTTCGGCA GAAAATATGT CAACGCCTCA AACGCGCAAA CGGGCGAAAG CGACAATGTC
CGTCTTCTGC TTGCTATACA GGGGACACTG AATAACCCTG ATGTACAGAT GGGTTATTAT
CTTAACGATG ACTCCCAGCC CTACTCTTCA CAAAACATGA TCGGCACACA AAGCAGTAAA
ATCGATCCCA ATGCCGAGCC CAACGTTGTC TCACTGCTGC TCACCAAACA GTGGTATATC
CGCCCCGGCA GCCAGGGAGG GCTGGGAGAC ATACCGTTCT CAAGTTTAGG AATATCAGCC
GGCACAGGCC TGCTTTCTTC CCAGATCTCC CAGTTTGTAG AGAAAGCCAC CGGCTTTGAA
AGTTTCAATG TCAATGTCGG GGTCGATGAA GAGGGTTCCC TGAGCGGCCT TGAATTTTCA
TTTGCATTTC TTGTTCCGCT AACCGAAGGA AAAGTCCGGT TCATCGGTAC GGGAAGCAGT
CCTGACATTG GCAAAACAGC TCTTTTCAAC TATTACGGAA ACAGTCAGCG ACTCGAATAC
CGTATATCTC CGAAACTGTT TCTGGAGGCG TACCGCTCAT ATGGCCTGTT CGGCAATGAC
GTCACAACGA CAAACCTTCT CGAACCAAAG GAAACCTATG GCCTCAGTCT TTCTTACAGG
GAACGATTCT ATAGCTGGGA GCAGTTCTGG GACAGGATAT TCTGA
 
Protein sequence
MERVKKYILG IAVSISALIL ILAVIVAIIL NSGSLDLMAK NRLIDFFNSE FQGKLNIEEV 
NLQFPSTIIL HQTQLYRENS ETPEFTAEKV TLNLNFLRLL SNFSSITIRS LKADSFFIHL
ERYPDGSTNI ERIFAPRKEQ DPDAPGLERF LCNRIDLTNG SAEYLDFQNK EADPELLTIA
DISFTGNKLR YSPENFSGII RNIGFQLPQK NFTLRKGSAK LSVTNKRLEI LDLKAKTGKS
SAELSLGLYE FNVFSQENPD RHSSSPAMLN LKAGSIHTDE LSIFFPDLAL PPGIYTASGK
AEGQLRKIDI RNAVIAHKNS LLRLQGELLN LNQPDFLGFR LETDSSRISG DFLQTAITDT
TIKNLAEPAG DLMISGYGQG NLKEFFTDLS IETESGDMLL SLQADTPDDA ETGYSGKFTL
RDIALHRFLT QDSSSVSGIN CTGSFSGTGI SPHPAEASLS IDLQNSYWQE QMLSGGTLDL
NYHDDILSTD VKIAGERMNV ALKGSIDWTK AVPVYEGKGS AVNLDLSKFL RSDGISSNLN
FSMLFRGEHF DPEKLNGNIS ARFSPSTIND YSLKEGSELS LRIVQKSPTS SIVLKSDFLD
FNAEGLYTFR EFLSGIQLTA SSAAREAAKN NIWAASPPPP PFAENIEKNF SADYTLTVRD
ISPLAVFLPV KGYKLSGKAT GKSYRSNGSF HLTSSIRIDR LSNEQGFSID NATLGVDATY
NSEGIVSASI DADASALDAE KQSIEQLSLT AAYDKSGLQA GLRLRIPEIE RSLTTDIRAA
RSNRLYTIRI SDLSITGGDG AWSLNKDSRI DIGRNFTRFY DLTLRKDKQV ISCDGLLSNE
VSGLFACSIE NLDMQELGIF FPESGMQGSL SSTLRVSGSP GAKTATLKIT GRELVYDDVI
IGNLNLSALH NGERLRTDFS TGSNLQGPLN DITGTASIPL KVNWFPLKYS IPDNKPVSAS
ASADHLSAEI LEVFLPFFET AEGTIPAKLV VKGKTPDPEI YFSTELKDTE ITVTPTETVY
LLSGSIVITP KKADFRDIQI KDVRGGTGRI NGSATLENLE ASTIDLTASF ENLLLFNKQD
KKDETSFGTI TGTSDRIRYY GDTAQPVLTG NLLITNADFT LYRTGSNEST KYVGAERFIT
FVPRYPEKID PDQPENPEKP VNPEFYYTLI DIITIKNLRL TSAVPLQYSM IFDRTRGEKL
EATLQNLSLN VNKNQQNYRL FGAVNISSGT YRFSNSNFDL EDGGRIVWNN VEIRDGVMLN
LFGRKYVNAS NAQTGESDNV RLLLAIQGTL NNPDVQMGYY LNDDSQPYSS QNMIGTQSSK
IDPNAEPNVV SLLLTKQWYI RPGSQGGLGD IPFSSLGISA GTGLLSSQIS QFVEKATGFE
SFNVNVGVDE EGSLSGLEFS FAFLVPLTEG KVRFIGTGSS PDIGKTALFN YYGNSQRLEY
RISPKLFLEA YRSYGLFGND VTTTNLLEPK ETYGLSLSYR ERFYSWEQFW DRIF