| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0239 |
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| Symbol | |
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| ID | 6373894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 227817 |
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| End bp | 229937 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642682753 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001958689 |
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| Protein GI | 189499219 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00519899 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACT TGATGAGTGA AACAAAAAAT CAATTTTTTT CACATCATGC AACCACATCT
TTTCCCTATT TTGCATCAGG TGTAAACCTC TATACCATTA TACATATGAA TCACACATTT
TACCAGCATA AACCTGTAAT CAGCAGCCGG AAGTTCGACG GCAGGAGGCG TGTCATCATT
GATCGTGTGT CTCCTGAGAT AGACGGCGGC CAATACCCTG TGAAGAGAAT CCCGGGGGAA
ACGGTTCGGG TGGAGGCTGA TATTTTTACT GACGGTGCTG ACGTTATCAG CGCCGAGATT
TGTTACCGGT CCGCATCGGC CCGTGCCTGG AAACGCTCTC CCATGATAGC GCTTTTCAAT
GACGCCTGGG AAGGGGAGTT TGCCGTTGGC GATCCTGGGA ACTACGAGTT CACTATCGAA
GCTTGGATCG ATCATTTTCA GACATGGCGG AGAGGGCTGA TAAAAAAAAT CGAGGCCGGT
CAGGATGTTT CCCTTGCATT TCGTATTGGC GCGGGGATAG TTGAAAAAGC GGTTGAGCGA
GCATCAAAAA GTGATGGCGC AAGGATGAGA GCCCTGATTT CCGTGATGAC TTCGGGGGAT
GCCGAGGAAG CTGCTTCGAC GGCACTGTCC GACGAGCTTG ACGGGCTGAT GCAGTCCTGC
CCGGACAAGG AGGCGGCCTC GCAGTATAAC AGGGTGCTCA AGGTCAGGGT TGACCAGAAA
AAGGCCGGGT TCAGTACCTG GTATGAATTT TTCCCCCGCT CGTGGGCCGT GGAACCGGGC
AGGCACGGAA CGTTCAGGGA GTGTAAACGT CTGCTTCCTC TCATTGCCCG GATGGGATTT
GATGTTGTCT ATCTTCCTCC GATTTATCCG ATCGGTTCGA CAAAGCGTAA AGGAAAAAAC
AACACTCTCG TCGCAGGGCC TGACGACCCC GGGAGCTGCT GGGCGATTGG AAGCGGTGAA
GGGGGGCATA AGTCTGTCCA TCCTGAACTG GGCACCATAG AAGATTTCGG GGAATTTGTC
CGGGAAGCAG AAGCCGAAGG CATCTCCGTG GCTCTGGATA TTGCGTTCCA GTGCTCCCCG
GACCATCCCT ATGTGAAAGA GCACCCTCAA TGGTTCAAAT GGCGTCCTGA CGGTACGGTT
CAGTTCGCGG AGAATCCGCC GAAAAGGTAT GAGGATATTC TTCCGCTTGA TTTCGAGACG
GAGGACTGGA AAAATCTCTG GACCGAACTG AAAAGTGTTC TGCTTTTCTG GATTGAAAAA
GGGGTCAGGA TCTTCAGGGT TGACAATCCG CACACCAAGG CTTTTCTTTT CTGGGACTGG
GTGATTGACG AGATTACCGG AGAGTATCCC GATACCGTTT TTCTTGCTGA AGCGTTTACC
CGTCCGAAGG TAATGGCAAG ACTTGCCAAA GGGGGGTTCA ATCAGTCGTA TACCTACTTT
ACCTGGAGAA ACACCAAGCA CGACCTTCAA AAGTATCTCA CGGAACTGAC CACGTCGGAA
GTGAAGGAGT ACATGAGGCC GAACTTCTGG CCGAATACGC CCGACATTCT GCATGAAGAG
CTGCAGACCG GAAGTCGAGC TACCTTTCTT ACCCGAATGG CGCTTGCGGC AACCCTTTCT
TCCAACTACG GGATGTACGC TCCTGCATAT GAGCTATGCG AGTACCTGCC TGTAAAGCCA
GGCAAGGAGG AGTATCTCGA TTCGGAGAAG TACGAGATCA AGCAATGGGA TATGGACAGG
CCTAGCAATA TCCGCGCCGA GATTACGGCG GTTAACCATA TCCGCAGGGA GAACGCCGCC
CTGCAGCAGA CAAATAACAT AGAATTTGTA AGGGTTGACG CCGGTGAGGG GCGTGAACAT
GATATGCTGA TGGGTTATGT GAAACGATCC GTGGATGACA GTAACATTAT CCTGACGGTT
GTGAATCTCG ATCCTCAGAA CACGCATGCC GGATGGCTGC GTTTTCCACT TGAAGCGTTC
AAGTTACCGC ATACCCATCA TTTCAGGGTT GAAGACCTTA TGAGCGGGCG CACCTTCGAG
TGGGATGGCG AATGGAACTA CGTAGAGCTG AATCCTGAAC ATATGCCGGT ACACATTTTT
AAAGTCAACC TGTTTTCTTA G
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| Protein sequence | MDYLMSETKN QFFSHHATTS FPYFASGVNL YTIIHMNHTF YQHKPVISSR KFDGRRRVII
DRVSPEIDGG QYPVKRIPGE TVRVEADIFT DGADVISAEI CYRSASARAW KRSPMIALFN
DAWEGEFAVG DPGNYEFTIE AWIDHFQTWR RGLIKKIEAG QDVSLAFRIG AGIVEKAVER
ASKSDGARMR ALISVMTSGD AEEAASTALS DELDGLMQSC PDKEAASQYN RVLKVRVDQK
KAGFSTWYEF FPRSWAVEPG RHGTFRECKR LLPLIARMGF DVVYLPPIYP IGSTKRKGKN
NTLVAGPDDP GSCWAIGSGE GGHKSVHPEL GTIEDFGEFV REAEAEGISV ALDIAFQCSP
DHPYVKEHPQ WFKWRPDGTV QFAENPPKRY EDILPLDFET EDWKNLWTEL KSVLLFWIEK
GVRIFRVDNP HTKAFLFWDW VIDEITGEYP DTVFLAEAFT RPKVMARLAK GGFNQSYTYF
TWRNTKHDLQ KYLTELTTSE VKEYMRPNFW PNTPDILHEE LQTGSRATFL TRMALAATLS
SNYGMYAPAY ELCEYLPVKP GKEEYLDSEK YEIKQWDMDR PSNIRAEITA VNHIRRENAA
LQQTNNIEFV RVDAGEGREH DMLMGYVKRS VDDSNIILTV VNLDPQNTHA GWLRFPLEAF
KLPHTHHFRV EDLMSGRTFE WDGEWNYVEL NPEHMPVHIF KVNLFS
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