Gene Cphamn1_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0226 
Symbol 
ID6373881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp216966 
End bp217706 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content57% 
IMG OID642682740 
Productprotein of unknown function DUF169 
Protein accessionYP_001958676 
Protein GI189499206 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0914773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00370988 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACTCCAG AAAAATTGTC GCGAACACTC GTCGAGAGTG AAGACCTTTC CTACAACCCG 
ATAGCGGTCA AGTTCGTCGC TTCGCTTGGC AACCTGCCGG AAGGGGTGAA AAAATTCGGG
GCCTTTTCAG GGCAAACCGC TCCAAAATCG TTTCTGTGTG CGATGTGGGG CGACGCTCTC
AGGGGAGCGG GGCCTTTCTA CACGACCAAA GACCAGCAGA TCTGCGGTGG AGGTGCCATT
TCGGCAGGGT TCGGAAGCCC CATGCCGCTC GAAGCCGCGG AGAAATTCAT GATCGGCGAC
GGAAAGCTGT TCGGGAACAT GGACGCTCTT CGATGCTCCC TGTCTTCGAC CATGCCTTTT
GAAGATGGGG AGTTCGAAGC AGAGATCGTC GGACCGCTTG CGGCAATGAA CGACGATACG
CTGCGACCGG ACGTGGTGCT GATCGTCTGC AAGCCTTACC AGGGACAGCA TATCATGAGG
GCTTACGGAT TCGACAGCGG CGAACCGGTT CACGGCATCG CTGGAGGATC GACGTGCGAA
ATGGTTTCGA GCTACGTGGT GAAAACTGGA AAACCGACGT TCACCCTCGG TGACACCGGC
GGCAACGCCG GTCTCGGCCT CGCGTCCGAT GAACTGATTC TTACCTTTCC CTACGACAGA
CTCGGTATCG CCGTCAGCAA TCTCCCGCGC ATATGCCGGA CATCGAGCAT GCACAAACAT
ACCCTGTTTC ACGAACGCTG A
 
Protein sequence
MTPEKLSRTL VESEDLSYNP IAVKFVASLG NLPEGVKKFG AFSGQTAPKS FLCAMWGDAL 
RGAGPFYTTK DQQICGGGAI SAGFGSPMPL EAAEKFMIGD GKLFGNMDAL RCSLSSTMPF
EDGEFEAEIV GPLAAMNDDT LRPDVVLIVC KPYQGQHIMR AYGFDSGEPV HGIAGGSTCE
MVSSYVVKTG KPTFTLGDTG GNAGLGLASD ELILTFPYDR LGIAVSNLPR ICRTSSMHKH
TLFHER