Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0185 |
Symbol | |
ID | 6373839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 180035 |
End bp | 180559 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642682703 |
Product | protein of unknown function DUF177 |
Protein accession | YP_001958640 |
Protein GI | 189499170 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00648042 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.827774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACAG AGAAGGGAGT GATCGGGATC AGGATTGCAG GCTTAAGCGA AGGGCTGCAC GAGTATGATT TCGCCTGCAA AGCATCGGAT TTCAAAAATC CTGAACTTGC CGAGCCGGCC TTTTGTAACG AGATCCGGGT GCGAATTGCA GCAGTCAGGA CCGAAAGGGA AATGACTGTC GATATCGAAA CGAAAACCGT TGCGGAATTC AGTTGCGACA GATGCCTCGA GCCGCTGAAA AAAGAACTGA CAGGAAAGTA CCGGATTTTG TTTGCTTTCA GTGACACCGG CGCACTTTCT GAAAAGAGTG ATGAGAACTA TCGTGCGCTC GACAGAAATG CCGTCACTGT AGACCTGACT GAAGATGTGC GTGAAACATT GCTTCTGTCA AAACCTATGA AGGTTGTCTG CGCTGACAAG TCCGCTTGTA CCCTGTATCA GGAAAACTCG CCTCTGAATG CAGACCATGA AAGTGAGACA GCAAGTCCAT GGAAAGAATC ACTTGAAAAA TTGAAGGGCA AGTAA
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Protein sequence | MVTEKGVIGI RIAGLSEGLH EYDFACKASD FKNPELAEPA FCNEIRVRIA AVRTEREMTV DIETKTVAEF SCDRCLEPLK KELTGKYRIL FAFSDTGALS EKSDENYRAL DRNAVTVDLT EDVRETLLLS KPMKVVCADK SACTLYQENS PLNADHESET ASPWKESLEK LKGK
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