Gene Cphamn1_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0111 
Symbol 
ID6373755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp104238 
End bp104975 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content48% 
IMG OID642682628 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001958575 
Protein GI189499105 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.376959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAA TAAGCCTGGA TGAGTTTGAG GGTCCGCTTG ACCTGCTTCT CTTCTTTATC 
AAGAGGGACG AACTTGATAT TTATAATATC CCGATTTCCA GAATTACCAA AGACTTTATC
GGATACCTCG AGGCCATGCA GAGCCTCAAT CTCGAAGTGG CCGCCGAATT CATCTACATG
GCTTCGTTAC TGATGAGTAT CAAGGCCAGA ATGCTTCTGC CAAATGAAAC TTCCGAAGAG
GGCGATGCAT CCGAATTCGA CCCCAGAACG GAACTGGTCG AACGCCTCAT GGAGTACAAG
CGCATCAAGG AGGGGGCGGA AAAAATGCGT TCACTCGAGG AAACGAGGAG CGCCATGTTT
GCCAGAGGGT ATTATGAATC GTTCGAGCCG GAAGTGATCG ACGAACTCGA TGAGCCGGTC
AACCGTTCCA CGCTCTATCA TCTTATCATG ACCTATAAAT CGGTTATGGA GAATATGCCG
AAAGTGCATG TGCAGAACGT AGACGAAGCT CCGGTAACTG TTGATGAACA GAGTGCGTTG
ATTCTCTCGA AACTGAGGGA AACAATACAG ATCTCATTCA GAACGATACT TAAAGAAGTC
GGTGAACCTC TTGTGCTTGT CGTTACCTTT CTTGCTGTGC TCGAACTCTG CCGCCGTCAG
AAGATCGTGG TGATTGTGAA GGACGGATAT GATGATTTCT GGATGTCGAG CAGGCAGCAT
CCATCATCCG GTGCCTGA
 
Protein sequence
MFRISLDEFE GPLDLLLFFI KRDELDIYNI PISRITKDFI GYLEAMQSLN LEVAAEFIYM 
ASLLMSIKAR MLLPNETSEE GDASEFDPRT ELVERLMEYK RIKEGAEKMR SLEETRSAMF
ARGYYESFEP EVIDELDEPV NRSTLYHLIM TYKSVMENMP KVHVQNVDEA PVTVDEQSAL
ILSKLRETIQ ISFRTILKEV GEPLVLVVTF LAVLELCRRQ KIVVIVKDGY DDFWMSSRQH
PSSGA