Gene Aasi_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1351 
Symbol 
ID6377669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1725426 
End bp1725986 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content34% 
IMG OID642682430 
Producthypothetical protein 
Protein accessionYP_001958385 
Protein GI189502668 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAA TTCAAAAGCA GTTAGATAAA TCCGATCAGC TGATGCAAAA AGCTTGTACG 
CATACGCAAA TAGAATTTAG TAAAATTCGT GCTGGAAGGG CTATGCCAGA TATGCTAGAT
GGTATTAGTA TTTTATATTA TAATGCTATG ACCCCACTTA ACCAAGTAGC AGCTATTACT
ACTCCAGATG CAAGAACACT AGTTATTAAG CCATGGGAGA GAAAATGTAT TCAGGAAATT
GAAAAGGCGA TTGTTAATAG TAAGCTAGGA CTTAATCCAC AAAATGATGG AGAAGTGGTT
AGGATTATTG TTCCTCCACT CACCGAAGAA CGTAGAAAAG ATCTGGTAAA ACAAGCAAAA
AACGAAGCAG AAAAAGGTAA GATTTCTATA AGGAATATTA GAAAAGATAT TAAGGAAACA
TTCAAACATC TACAAAAAGA TGGTGCTTCT GAGGATACTA TCAAAAGAGC AGAAGAAAAA
CTGCAAAACT TGACTGATAA GCATATTCAT AATATTGATA ACCTCTTAAC TCATAAAGAA
GCAGAAATAT TAGAAGTGTA G
 
Protein sequence
MDEIQKQLDK SDQLMQKACT HTQIEFSKIR AGRAMPDMLD GISILYYNAM TPLNQVAAIT 
TPDARTLVIK PWERKCIQEI EKAIVNSKLG LNPQNDGEVV RIIVPPLTEE RRKDLVKQAK
NEAEKGKISI RNIRKDIKET FKHLQKDGAS EDTIKRAEEK LQNLTDKHIH NIDNLLTHKE
AEILEV