Gene Aasi_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1205 
Symbol 
ID6376752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1540223 
End bp1540771 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content36% 
IMG OID642682304 
Producthypothetical protein 
Protein accessionYP_001958262 
Protein GI189502545 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000418064 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTTTT ATAATCAATC TCTTTTAGAT GTTATAGACG AATATGGCAA TTTTACAGGG 
CAGCGAGCGT CTAGAGAAGA AGTACATACG TTAGGCCTTA TCCATCGGGC TGTACATTTA
TATTTGGTAG ATGAAGAAGA TCATCTACTC ATGCAAAAAA GAGCTAAGAC AGTAGACCAT
TACCCTAACG AATGGAGTAT TTCTTTGACT GGTCATGTTG ATGCAAGAGA GAGTAGTAGC
GAAGCGCTTT ATCGCGAGGT ACGAGAAGAA CTTAGACTAG AACCCACTAC CATGAAGTTT
GATTTCTTGT TTTCCTATAG GCAAGATTAT ACTTTACATA AATCTTATAT AGACCGACAG
TTCAATGATG TTTATTTTTG CCAACATCCT TTTAGGTTGG AGAATATTCA CTTTGATACC
AATGAGGTTG CTCGCTTGGA ACGGATTCCT TTTAAGCAAT TTAAAGATAT GGTAAATGAT
AAAGGAAGTT TGATTTTACA AATTTATACC AAAGAACATG CTGGCTTGGA CCATTTGGGA
ATAATTTAA
 
Protein sequence
MNFYNQSLLD VIDEYGNFTG QRASREEVHT LGLIHRAVHL YLVDEEDHLL MQKRAKTVDH 
YPNEWSISLT GHVDARESSS EALYREVREE LRLEPTTMKF DFLFSYRQDY TLHKSYIDRQ
FNDVYFCQHP FRLENIHFDT NEVARLERIP FKQFKDMVND KGSLILQIYT KEHAGLDHLG
II