Gene Aasi_0775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0775 
Symbol 
ID6377042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp989621 
End bp990595 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content35% 
IMG OID642681920 
Producthypothetical protein 
Protein accessionYP_001957883 
Protein GI189502166 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACAG ATATTTCACT ATTAGTTAGT AAAGAGCTTT CAAAGGTAAA TGATTATATA 
AACAGATGCT TGTATACTGA AAATCCTGTA ATACAACAAG TTATTCAATA CTCATTTCAG
CAACAAGGCA AACAACTAAG ACCTCAATTG GTACTTATAG TAGCAAGTGT ACTGGGAAAC
GATATTACAG AAAAAACACG TCGAGGTGCA GCTTTAGTTT CTTTACTACA TCACGCATCA
CTTATACATG ACGATGTAGT AGATGAGGCT ACTTATAGAA GACATAAGGA AACGGTTAAT
GCAAGATGGG GCAATAAACT AGCTGTATTA TTTGGAGATT ACGTGCTAGC CAATAGCTTG
CAAATAGCCA TAGAAAATCA AGATTATGAT TTTTTACCTA TGCTTACAAT AACGACTCAG
ACTATGAGCG AAGGTGAAAT CTTACAGCTC AAGCAAGCAC AAGAAATAAT GGCTTCAGAA
GCAACTTATC TAGAGATTAT TCAAAAAAAG ACAGCTAGCC TGTTAGCTGC TTCTTGTGCT
ATGGGTGCTA TGTCTGTGTC TGCTTCGCAG GAGCAGATTG AAATCATGTA TGCAATAGGA
GAGCAAATAG GTATGGCTTT TCAACTTAGC GATGACTTAA TAGATTATGG TGTTACTACT
AATGCTGGCA AAGCAACGTT TATGGATTTA AAAGCTCATA CTTTAACTTT GCCGTTGATA
TATGCTTTGC AGCAAGCATC TGCCTCTGAA ACCCAATATA TTTTGTCACT CGTTAAAAGT
TACAATACCG ATGACACTAA ATTTACACAA GAAATTTTGT CATTGATAAA TAAGGTAGGA
GGTATTAAGT ATACCTTGCA GAAAATAAAT TTTTATCAGC AAAAAGCGTT GGAGTTAATA
AAAACTCATT TACGTCCCTC AGCTTATACA GATGCTTTGG TGGCATTAAT TCATAAAATG
ATATTAACAA AGTAG
 
Protein sequence
MLTDISLLVS KELSKVNDYI NRCLYTENPV IQQVIQYSFQ QQGKQLRPQL VLIVASVLGN 
DITEKTRRGA ALVSLLHHAS LIHDDVVDEA TYRRHKETVN ARWGNKLAVL FGDYVLANSL
QIAIENQDYD FLPMLTITTQ TMSEGEILQL KQAQEIMASE ATYLEIIQKK TASLLAASCA
MGAMSVSASQ EQIEIMYAIG EQIGMAFQLS DDLIDYGVTT NAGKATFMDL KAHTLTLPLI
YALQQASASE TQYILSLVKS YNTDDTKFTQ EILSLINKVG GIKYTLQKIN FYQQKALELI
KTHLRPSAYT DALVALIHKM ILTK