Gene Aasi_0560 details

Gene Information

• Locus tag: Aasi_0560
• Symbol: infC
• ID: 6376531
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Amoebophilus asiaticus 5a2
• Kingdom: Bacteria
• Replicon accession: NC_010830
• Strand: +
• Start bp: 720681
• End bp: 721241
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 642681714
• Product: translation initiation factor IF-3
• Protein accession: YP_001957690
• Protein GI: 189501973
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.00554989
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

TTGACTATTA GCGATAGAAA ATTTCAACCA AGATTCAATA GAAGGGTAGA AGAACCTTAT 
AGAATCAATG AACGAATCAC TGCACCTGAA GTGCGGGTAG TAGGTGAAGA TTTAGAACCA 
GGCGTATATA AACTTGCAGA AGCCTTAAAG ATGGCACAAG TAAGGGAACT CGACCTAGTA 
GAAATATCTC CTAATGCGGA GCCGCCTGTA TGTAAGATTA TTGATTATTC TAAGTTTAAG 
TATGAGCAGA AAAGGAAGCA AAGAGAGATT AAATCAAAAT CGCAGAAGAC TACAATTAAA 
GAAATAAGGC TAGGGCCCAA TACAGATGAG CACGACCTGA ACTTTAAGAT TAAACATGCT 
ACCAAGTTCT TGCAAGAAGG AGCTAAAGTT AAAGTTTATG TGCAATTTGT AGGACGTACC 
ATTGTATTTA AAGAAAGAGG GGAATTACTC TTGTTGAAGT TTGCACAAGC GCTTGAAGAA 
CACGGGAAAA TAGAGCATAT GCCCAAGTTA GAAGGTAGAA AAATGCACTT ATCTATTAGT 
CCAAAGAATT CTAAAGGTTA A 

 

Protein sequence

MTISDRKFQP RFNRRVEEPY RINERITAPE VRVVGEDLEP GVYKLAEALK MAQVRELDLV 
EISPNAEPPV CKIIDYSKFK YEQKRKQREI KSKSQKTTIK EIRLGPNTDE HDLNFKIKHA 
TKFLQEGAKV KVYVQFVGRT IVFKERGELL LLKFAQALEE HGKIEHMPKL EGRKMHLSIS 
PKNSKG