| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0399 |
|---|
| Symbol | rpsF |
|---|
| ID | 6377330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 470185 |
|---|
| End bp | 470568 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642681564 |
|---|
| Product | 30S ribosomal protein S6 |
|---|
| Protein accession | YP_001957546 |
|---|
| Protein GI | 189501829 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0360] Ribosomal protein S6 |
|---|
| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAA AAAATTATGA AACGGTATTT GTTTTGACGC CCGTATTGAC TAGTGAGCAA
ACTGAAGGTA CTATTACCAA GTTTAGAAAT TTCCTCTTGG AAAAAGAAGT AGAAATAGTA
CATGAAGAAG CAATCGGGTT GAAAAAACTA GCTTATCCTA TTCAACATAA AAATACAGGA
ATATACCACC TGATAGAGTT TAAAGCGAAA CCAGAGGTAA TTGCTACCTT GGAGATTGCT
TATAAACGTG ATGAAAACAT TATCCGCTTT TTGACTTTTG TATTGGATAA AGACGGTATC
GAATACAATG AACAAAAGAG AAATGGAACG CTACAATTAA AAAAACATAT TGAATTTGAA
CCTAAGAAGG AGGTGATAGC ATGA
|
|---|
| Protein sequence | MKLKNYETVF VLTPVLTSEQ TEGTITKFRN FLLEKEVEIV HEEAIGLKKL AYPIQHKNTG
IYHLIEFKAK PEVIATLEIA YKRDENIIRF LTFVLDKDGI EYNEQKRNGT LQLKKHIEFE
PKKEVIA
|
|---|
| |