| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0388 |
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| Symbol | |
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| ID | 6376807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 460589 |
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| End bp | 461281 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642681556 |
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| Product | hypothetical protein |
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| Protein accession | YP_001957538 |
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| Protein GI | 189501821 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTGC AACAATTGAA TCATTCAGAA GGAACCATGC TCCTTATTAA TAAACCATTA
GGCTGGACGT CTTTTGACAT AGTAAAAAAG CTTAGAAATA CTTTTAAAAT AAAGAAAATA
GGACATGCTG GTACGCTAGA TCCCTTAGCT ACAGGGCTTT TAATTATTTG TACAGAAAAG
AAAACCAAAA CCATAAGTTA CTATCAAGAA TTAGCTAAAG TTTATACTGG CCAGCTAGTA
TTAGGAAAAA CTACACCTTC TATTGACTTA GAAACTCCTT TTGACAGCTC CGTCCCATAT
GACCATATTA CTGAGACAGC TATATACGAG CTAGCACAAA CTTTTATAGG CTGTATTACA
CAAATCCCTC CTGCCTACTC GGCTATAAAA ACTAAAGGAG TTAGAGCCTA CAAAAAGGCA
CGGGAAGGTA GTCAACCTGA CTTACAGCCT AGAGAGGTAA CTATCCATAA TTTTACTATT
ACCGCTATTG ATTTACCATC TGTTAATTTT GAGATTACTT GTAGCAAAGG AACTTATATA
CGCAGTATTG TACGTGATTT TGCAGAAAGA TTAGGTACAG GGGCTTATTT ATCAGAGCTA
TGTAGAACTC ATATAGGGCC ATATAGCCTC AATGAAGCTT ACGAAATAGA AAATCTTACA
AAGTTGGATG ATTCACGCTT AAATGTTTTA TAA
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| Protein sequence | MELQQLNHSE GTMLLINKPL GWTSFDIVKK LRNTFKIKKI GHAGTLDPLA TGLLIICTEK
KTKTISYYQE LAKVYTGQLV LGKTTPSIDL ETPFDSSVPY DHITETAIYE LAQTFIGCIT
QIPPAYSAIK TKGVRAYKKA REGSQPDLQP REVTIHNFTI TAIDLPSVNF EITCSKGTYI
RSIVRDFAER LGTGAYLSEL CRTHIGPYSL NEAYEIENLT KLDDSRLNVL
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