| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0127 |
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| Symbol | rpsL |
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| ID | 6377720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 147926 |
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| End bp | 148333 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642681318 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001957303 |
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| Protein GI | 189501586 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACCA TACAACAATT AATCAGAAAA GGAAGAAAGA AAATAAAGTA TAACTCTAAG
TCCCCTGCTT TGGGAGGATG CCCACAAAGA AGAGGTATCT GTACCAAGGT AACTACAATG
AAGCCTAGGA AGCCTAATTC TTCTATGAAG AAGGTGGCTA AAGTAAGGCT GTCTAATGGA
AAGGAGGTTA ACGTTTATAT TCCTGGTGAA GGACATAATC TGCAAGAGCA CTCTGCTGTA
TTAATTCAAG GAGGTGGAGT AAACGACTTG CCAGGTATCA ACTACCGTAT CATACGTGGC
ACTTTAGATA CTGCAGGCGT TAACGGACGT ATACAAAGTA GATCGAGATA TGGTGCGAAA
AAAGGCGCCG CTAAGCAGGC AGCAGCAGCT AAATCAAAAA AGAAATAA
|
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| Protein sequence | MATIQQLIRK GRKKIKYNSK SPALGGCPQR RGICTKVTTM KPRKPNSSMK KVAKVRLSNG
KEVNVYIPGE GHNLQEHSAV LIQGGGVNDL PGINYRIIRG TLDTAGVNGR IQSRSRYGAK
KGAAKQAAAA KSKKK
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