Gene Aasi_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0109 
Symbol 
ID6377700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp126750 
End bp127109 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content36% 
IMG OID642681301 
Product30S ribosomal protein S16 
Protein accessionYP_001957286 
Protein GI189501569 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTAA AAATAAGATT AGCAAAAAAA GGACGTAAGA AATTAGCACT ATATGATATT 
GTGGTGGCTG ACCAAAGAGC ACCTAGAGAT GGGCGTTTCA TAGAAAAATT AGGCAATTAC
AATCCTAATA CAAACCCTAG TACCGTTGTA CTACATGAAG ATAAAGTAAT TCAGTGGTTA
TTTAATGGTG CGCAGCCCAC CAATACTGTT AAGAATATTT TATCCTCTCA AGGTATCTTA
CTAAAAAGAC ATCTTCAAAT AGGTGTGAAA AAAGGTGCTA TTACACAAGA GGAAGCAGAC
AAAAGATTCC TTGTTTGGAA AGAGTCTAAA ACACAAAAAC CAGGCAAGTT CAAAGCCTAG
 
Protein sequence
MAVKIRLAKK GRKKLALYDI VVADQRAPRD GRFIEKLGNY NPNTNPSTVV LHEDKVIQWL 
FNGAQPTNTV KNILSSQGIL LKRHLQIGVK KGAITQEEAD KRFLVWKESK TQKPGKFKA