Gene BLD_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1940 
Symbol 
ID6364229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand- 
Start bp2311540 
End bp2312154 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content61% 
IMG OID642681149 
ProductAcrR family transcriptional regulator 
Protein accessionYP_001955883 
Protein GI189440802 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.682868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACGC GCGGAGAAGA ACGCCTCAAG GCGATCACCG ATGCCGCCAC CGAAGTGGTG 
GCCGAGCGCG GCTATTACGG CATGACCATC CAGGAGGTCT CCGATCGCGT CGGCATCACG 
CAGGCCGGGC TGCTCAAATA CGTCAAGAAC AAGAACGGGC TGCTGATGCT GGTGCTGCGT 
CGATACGAAG ATTCCAGCGA AGCCGGAGAC TACATTCAGA GCAAACTTGC GCTTACGCCC 
GAACAGCGGG AGCTTTCTCC TCTGCTGATG CCCGAGTATT ACCGGACCAT CGCCGAGGAC 
ACCATGAAAC GCCCGCAACT CACACAGCTG TATCTGGTGC TGCGTGCCGA AGCCATCGAC 
CCCAATCACC CGGCGCACGA GTACTACGCC CAGCGTGGCG GACGGCTGCG CGCGCAGATC 
GGCAGCTATC CGTGGAAGCT GCCGCCCGAA TATAACACCC CGCAGAAGAT CGGGTTGCTG 
TCGATGTGCG TCGGCTCGGC CATGGAGGGC TTGCAATCCC GCTGGCTTGG CGAGCCAGAC 
ATCGACTTCA TGTCCAGCTG GTCCCAGTAC GAGAACATCC TGTTCCCTCG CCCCCACTGG 
AACGGCTACC GCTGA
 
Protein sequence
MGTRGEERLK AITDAATEVV AERGYYGMTI QEVSDRVGIT QAGLLKYVKN KNGLLMLVLR 
RYEDSSEAGD YIQSKLALTP EQRELSPLLM PEYYRTIAED TMKRPQLTQL YLVLRAEAID 
PNHPAHEYYA QRGGRLRAQI GSYPWKLPPE YNTPQKIGLL SMCVGSAMEG LQSRWLGEPD 
IDFMSSWSQY ENILFPRPHW NGYR