| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1861 |
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| Symbol | xylH |
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| ID | 6364460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2217533 |
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| End bp | 2218750 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642681068 |
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| Product | xylose ABC transporter permease |
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| Protein accession | YP_001955804 |
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| Protein GI | 189440723 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0485128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG CAACTGCAAC ACCTGCAAAG AAAGAAGAAA AGACCGGCCT GCTGGCCACG
GTTGCCAACA ATGCCCGTCA ATACGGTATT GTCGGCGCAC TGCTGGTCAT CGTCGTGGCC
TTCGAGGTCC TGACCGGAGG CGTGCTGCTG AAGCCGAACT CCTTCGTGTC CCTGATTCAG
CAGAACGCTT ACGTGATCAT CCTGGCCATT GGTATGGTGA TGGTCATCAT CGCCACCCAC
ATCGACCTTT CGGTTGGTTC CTTGGTAGCC TTCATCGGTG GTGTGTGTGC ACTGCTGATG
GAACGCGCCG GAGTCAACTG GATGCTCGCC ATCGTCATCG CTCTGGTCGT CGGCCTGATC
GTCGGCGTCT GGCAGGGCTT CTGGGTCGCC GTCATCGGCA TCCCGGGCTT CATTACCACT
CTGGCCGGCA TGTTGATCTT CCGTGGTCTC GCCACCGTGA TCGTCGGCGA ATCCGTGCCG
ATTACCTCCC TCGAATTCCG TGGCATTGCC CGTAACTACC TGCCCAACAT CCTTGGCTGG
TGGGGTCCGT TCGATGGTCT GACCATTGTG CTCGGCATCC TGTGCATCGT CGGCTTTGCC
TGGAGCCAGC TGCGCAAGCG CGCCCGTGTG GCCAAGGTCG GCCTGGTGCC CGAGCCGATG
AGCCTGACCG TCCTCAAAAT TGTGCTTGCC GCGGTCGTCA TCGCCTTCGT CACCTACCTG
CTGGCTTCCT CCGGTAACGC TGATCAGGGT GGTACCCCGA TCATGCTGGT GATCGTCGGT
GTGCTGGTCT TCATCTACAA CTTCATCCTG ACCAAGACCG TGTTCGGTCG CCACGTGTAC
GCCGTTGGTG GCAACCGCAA GGCCGCCATC CTCTCCGGTA TCAACACCCG CCGCGTGGAC
TTCCTGCTGT TCGTCCACAT GGGCTTCCTG TCCGCAGTGG CCGCTGTCTG CATGCTCTCC
CGTCTGGCTT CCGCAACTGC TCAGGCCGGT ATGGAGTTCG AGATGGACGC CATCGCCGCC
TGCTTCATCG GTGGCACGGC CGTTACCGGT GGTATTGGTA CCATCCCGGG CGCTGTGATC
GGTGCATTCG TGATGGGTGT TATCAACCAG GGTCTGTCGA TCATGGGTGT TGACACCGCC
GTGGTGAAGA CCATCAAGGG CCTCGTGCTC CTGCTGGCCG TCGCCGTGGA CATCATGTCC
AAGCGCAAGA AGAGCTGA
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| Protein sequence | MSAATATPAK KEEKTGLLAT VANNARQYGI VGALLVIVVA FEVLTGGVLL KPNSFVSLIQ
QNAYVIILAI GMVMVIIATH IDLSVGSLVA FIGGVCALLM ERAGVNWMLA IVIALVVGLI
VGVWQGFWVA VIGIPGFITT LAGMLIFRGL ATVIVGESVP ITSLEFRGIA RNYLPNILGW
WGPFDGLTIV LGILCIVGFA WSQLRKRARV AKVGLVPEPM SLTVLKIVLA AVVIAFVTYL
LASSGNADQG GTPIMLVIVG VLVFIYNFIL TKTVFGRHVY AVGGNRKAAI LSGINTRRVD
FLLFVHMGFL SAVAAVCMLS RLASATAQAG MEFEMDAIAA CFIGGTAVTG GIGTIPGAVI
GAFVMGVINQ GLSIMGVDTA VVKTIKGLVL LLAVAVDIMS KRKKS
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