| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1841 |
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| Symbol | perM |
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| ID | 6364034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2192748 |
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| End bp | 2194439 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642681047 |
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| Product | permease |
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| Protein accession | YP_001955784 |
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| Protein GI | 189440703 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC GCGCGCGAAA CATAAACAGC ACCGACACGT CGAGAAGCGG TGCCGCAGAA
GCCGGGGCAG ACCCGGACGA CGAGAATCGT ATCGACTTTG GTACTTTGTT CCCCGCCAAG
GGAGATTCCC GCAGGCCACC GGAATGGTTC GGCCGCGCGC TGCTGTATGT GGCCCTCGCC
GTCATCGTAT TCATGTTCTG CTGGCGCTCG TGGGGCGACA TCTCCTATCT GGTGTTCGAC
ATCATCATCT CGCTGTTCCT GGCGCTGGCC GTCGAACCGC TGGTGGTGGC GCTGGTAGCT
CATGGCTGGA AGCGTGGCGT GGCTTCCGCC GTCAGTCTGG TGGGCGTGGC CGTGGTCGTG
GGTGTGCTGC TCACGCTGTT CGGCAATATG TTTGTACAGC AGATGATTGC CATGGTCCGC
GGTTTGCCGG CAATGTATGG GCAGATTCGT GAGTTCGTGG ACCAGCACGC CACGTTCAAG
ATGCCGGAGA TCAGCAATCT TGGCATGGAA ATCTTCAACA ATATCCAGAC CTCGTGGGTC
ACCGATTTCG CCGGCACCGC CATGAGTACG GTGGGTGGCC TGTTCTCCTT CCTGCTGAAC
CTCATGACCG TGGTAATGAC CACGTATTAC ATCTCCGCCG CCGGCCCAAA GCTGCGCCGC
TCCTTCTGCC AGTGGCTGGC CCCCAACACG CAGCGCCGAT TCCTGCTGGT GTGGACCGTG
GCCCAAGGCC AGATTTCGTC CTTCCTGTTC TCCCGTTCGA TTCTGGCGCT GATCAACGCC
ACCTGCACCG CCATCTTCTT GGAGATCCTG CATGTGCCCT ACTGGCTGCC GTTGGCCCTG
TTCTGCGGCG TGGTATCCCA GTTCATCCCC ACGGTCGGCA CCTATATCGG CGGTGCGCTG
CCGGTGCTGT TCGCTTGGGG CAACCGCGGG TGGACGTACG CCGTGGCGGT GCTGGTGTTC
ATCATCGTCT ACCAGCAGAT CGAGAACCTG ATTCTCTCGC CGAGGATTTC GCAGCGCACG
ATGGATATCA ACGCGGCCGT CGCCTTCCTC TCGGTGCTGG CGTTCGGCTC GCTGTTCGGC
GCATTCGGCG CGTTCCTGGC GCTGCCGGTC ACCGCATCGC TGCAGGCCAT CTTCCGTGCG
TACACCAGGC GCTATGAGCT GATTGACTCA CCGCTGATGA ACGATCCGAC TCCGGAGAAG
AAGTCCAAGA TCGTCGAGGC GTCCGAGGCG TTCGGCGAGC ACGTATTGCA GCCAATCGGC
GAGCACATGC CGCGTGCGGC CAGGGGATCC ACCAACCGCG TGCCGATGAA TGAGGAACTG
CGTTTGCTGC AGGAACAGAT TTATGCGATT CCGTCGCACG AGACGAAAGA ATCCGATTTG
GACGATTCCG CCACCGTGGC GATTCCGAAG AACGTGCTAT CCTCCAGCGC TCGCAAGGGA
TTGCGCGGCA CCGAGCCGGA GTCGGATGCC GATGATACCG ATAACGCCGA TAATACAGTC
GGTGCGGATG CAAGCTTTGA TGAGCCGGAT ACGGCGGCGA TTCCGCAGCG TGGTGCCGCG
GATACGCAGC AGTCTGAGCA GCCCGAGCAG CCTGAGCGGT CCGCCGAACA GCCTGAGCAG
CCCGAGCAAC GCAAGCAAAC CAAGCAGTCT GATCAATCTG CCTCCAGCAA TCCTAGGGCA
GGGTGGCGCT GA
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| Protein sequence | MSERARNINS TDTSRSGAAE AGADPDDENR IDFGTLFPAK GDSRRPPEWF GRALLYVALA
VIVFMFCWRS WGDISYLVFD IIISLFLALA VEPLVVALVA HGWKRGVASA VSLVGVAVVV
GVLLTLFGNM FVQQMIAMVR GLPAMYGQIR EFVDQHATFK MPEISNLGME IFNNIQTSWV
TDFAGTAMST VGGLFSFLLN LMTVVMTTYY ISAAGPKLRR SFCQWLAPNT QRRFLLVWTV
AQGQISSFLF SRSILALINA TCTAIFLEIL HVPYWLPLAL FCGVVSQFIP TVGTYIGGAL
PVLFAWGNRG WTYAVAVLVF IIVYQQIENL ILSPRISQRT MDINAAVAFL SVLAFGSLFG
AFGAFLALPV TASLQAIFRA YTRRYELIDS PLMNDPTPEK KSKIVEASEA FGEHVLQPIG
EHMPRAARGS TNRVPMNEEL RLLQEQIYAI PSHETKESDL DDSATVAIPK NVLSSSARKG
LRGTEPESDA DDTDNADNTV GADASFDEPD TAAIPQRGAA DTQQSEQPEQ PERSAEQPEQ
PEQRKQTKQS DQSASSNPRA GWR
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