| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1660 |
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| Symbol | |
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| ID | 6364554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1996038 |
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| End bp | 1998041 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642680856 |
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| Product | carbohydrate binding domain/beta-xylosidase family protein |
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| Protein accession | YP_001955603 |
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| Protein GI | 189440522 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.324921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGAAA ACAAGTATGG CACGAGCAAT GCCGACTTCA TTGTCGACGA CATTTCCGTA
ACCGGTTCGG ATTCTGGTTC CTCATTCGTG CCGCCGACTA CGGGTACGGC AACGGCAGCC
AAGGCTTTCG GCGACTATTC AAACCCGATT ATCGATTATT GGTATGGCGC CGATCCGTGG
GCTATGGAAT ACAACGGACG CGTATATATC TACACTACGG GTGATGGCAC TTCTGTGAAT
GCTGATGGCT CGTTGAATTA TGACTATGAA TATGACAGTA CTGGGCAGAT CAAGGACAAT
TCGTTCGCTC AAGTAAAGAC CATCAATGTT CTGTCCAGTG ATGACATGGT CAATTGGCGT
AATGAGGGTT ACATTCGTGT GGCTGGAGAA CAGGGGGTGG CCACCTGGGC CAGCAATTCC
TGGGCTCCTG CCGTCGCTCA TAAGACCATC AACGGTAAAG AGAAGTTCTT CCTGTATTTC
GCCAATGGCG GCAGCGGTAT CGGTGTGCTG ACCTCGGATT CTCCTGTTGG TCCGTGGAAG
GACGAAACCG GTGAGCTGTT GATTAAGGGC GGTACTCCTG AATCCGCTGG TGTGGTCTGG
CTGTTTGATC CCGCGGTGTT CGTGGATGAT GACGGGCAGG GCTACCTGTA TTACGGAGGT
GGTGTTCCGA CAGGCGAGGA AGAACATCCG AACACGGCTC GCGTTATTAA ACTGTCCGAT
GACATGCTGC ATACCGAAGG TGAGGCTCAG GTCATAGACG CACCTGCCAT GTTTGAGGAC
TCCGGGATTG CCAAGATAGG TGGTACTTAT TACTACTCGT ATTGCACTAA TTTCAGCCAT
GACAACGTAA TTGATGGTAA CACGGTCGGT TACGGCAATA TCGCGTATAT GACTTCAGAC
AACCCGATGG GGCCGTTCAC TTATCAGGGT GAGATTCTGA AGAATCCGAG CACGTATTTC
GGTGTTGGCG GCAACAATCA TCACGCGATG GTTCAACTTG GCGACCAGTG GTATATGACC
TACCATGCGC AAACGGTGGC AAAGGAATTG ATGAACGGCG GTAATCTTGA CGCGGCGCAT
GGCTACCGAA ATACTCATCT CGATCCGATT ACGGTTAACG AGGATGGTTC CATTGCCGAT
ATTGCAATGA CATATGAGGG TCTCTCTTCG GTGAAGAATC TGGACGCGTA TCAAGATGGA
GGCATTCCAG CTTCCACCAT TGCATGGGAT TCCGGCATTC AGAACGCATA TGACCTGACT
TCTGGTGTGC GCGTGGTCGA TATGACTACA GACAATTCCG AAGGTCAGAA GCTCAGCAAT
ATTAATAATG GTGAGTGGAC GTCTTTGGCG AATGTCGATT TCGGGAATAA CGGCGCCTCT
TCGCTGACTG TGACTGCAGC TGGCAAAGCC GGAGGCATCC TTGAGATTCG TCTTGATGAT
CCGGATTCCG AACCTGTGGC TTCTATTTCG ATTCCTGCCG GTGATGGATC CGAGTACGCC
GATTACACGA CCACCCTTGA GGGTGTGACA GGGGTGCATC ATGTGGTGTT CTCCTTCAAA
TCCGATGGTG GTGCGAATGC TCAGGATGAG CTGTACGACA TCACTACGTA CACTTTCACG
GAGTCGCAGG ATGAAACTCC TTCGACTCCG GTGGACAAGT CTGATTTGCA GAGCGCAGTG
AATGAGAATT CCGGCCTGAA CGCTTCCGAT TACACGGAAG AGAGCTGGAA GGTGTTTGCT
GACGCATTGC AGAAGGCTCA GGCGGTATTG CAGGATGAAT CCGCTACTGA ACAGCAGGTT
CAAGATGCGC TTGCTGCATT GAATAGTGCA CGTGCCGGTC TGAAGCTGGC TGATGATTCC
ACTGATGGCA ATGCCGACGG CTCCAATGAC GATGGCGTGG ATTTGGCACA AACCGGTTCC
TCTGTCTTGC CTGGTGCTGT GATTGTCGCT TGCTTGGCTC TCACTGGTGT GATCGTAGCG
CGAGTGCGTC GCGAGATGCG CTAG
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| Protein sequence | MIENKYGTSN ADFIVDDISV TGSDSGSSFV PPTTGTATAA KAFGDYSNPI IDYWYGADPW
AMEYNGRVYI YTTGDGTSVN ADGSLNYDYE YDSTGQIKDN SFAQVKTINV LSSDDMVNWR
NEGYIRVAGE QGVATWASNS WAPAVAHKTI NGKEKFFLYF ANGGSGIGVL TSDSPVGPWK
DETGELLIKG GTPESAGVVW LFDPAVFVDD DGQGYLYYGG GVPTGEEEHP NTARVIKLSD
DMLHTEGEAQ VIDAPAMFED SGIAKIGGTY YYSYCTNFSH DNVIDGNTVG YGNIAYMTSD
NPMGPFTYQG EILKNPSTYF GVGGNNHHAM VQLGDQWYMT YHAQTVAKEL MNGGNLDAAH
GYRNTHLDPI TVNEDGSIAD IAMTYEGLSS VKNLDAYQDG GIPASTIAWD SGIQNAYDLT
SGVRVVDMTT DNSEGQKLSN INNGEWTSLA NVDFGNNGAS SLTVTAAGKA GGILEIRLDD
PDSEPVASIS IPAGDGSEYA DYTTTLEGVT GVHHVVFSFK SDGGANAQDE LYDITTYTFT
ESQDETPSTP VDKSDLQSAV NENSGLNASD YTEESWKVFA DALQKAQAVL QDESATEQQV
QDALAALNSA RAGLKLADDS TDGNADGSND DGVDLAQTGS SVLPGAVIVA CLALTGVIVA
RVRREMR
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