| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1626 |
|---|
| Symbol | |
|---|
| ID | 6363429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1948297 |
|---|
| End bp | 1949049 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642680821 |
|---|
| Product | IclR-type transcriptional regulator |
|---|
| Protein accession | YP_001955569 |
|---|
| Protein GI | 189440488 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG ACAAACGTGA ACCGACCCGT GCTTTAGACA AGGCGAGTCG TGTGATGGAC
GCATTGGCGG CGGAGAATGG CCTGTCTCCG GCAGATATCG CCGACGCCTG TGATATCCCG
CGATCCTCCG TATACCGTGT GCTGGATGGA CTGGTCGATG TGGGGTGGGC CGTAACGGAT
ACGGATGGCA ACTACTCATT ATCGCTGGAC TGGCTGCGAT TGGCTGATGC CGCTCGCACG
TCTCGTACCG AATGGCAGCC TGCGATTGCG GTCATGCATG CCATCACCGC GCAAACCGGC
ATGACATCAT TCCTCAGTGT GGTCTCCGGC ACTGAATTGG TATGCGTGGA ATGCGCGCAA
GGTCATGCCA TCGATTCGCT GATCCTGCGC CCGGGCCGCG TGCTGTCTCT GCATGCTGGC
GCGGCCGGCC GCGTGGCCTT GGCGTATTTC GAGGATGCCG ATGCCGAACG CTATCTTGCA
GGAGCTCCGT TCCCGGCATA TAACGAGAAC ACGCTGGTCA GTGTGGAACA GTTGCGCGAG
GATATTCGCT TGACTCGCGA ACGTGGATAT GCACTGTCGG ATGAGGATGT GACGTTGGGT
GTCGGTGCCG TTGGTGTACC GATTGTGGAC AACGAGTCCG GTCGCGTGAT CGCCAGCCTG
TCCGCCGGTG GATTCGTGGA CGAAGTGTTA GCCACTCAAG AATCCTTGGC CGCGTTACTG
CACGATGGCG TACACGAGAT TCAGGCAGCC TGA
|
|---|
| Protein sequence | MAEDKREPTR ALDKASRVMD ALAAENGLSP ADIADACDIP RSSVYRVLDG LVDVGWAVTD
TDGNYSLSLD WLRLADAART SRTEWQPAIA VMHAITAQTG MTSFLSVVSG TELVCVECAQ
GHAIDSLILR PGRVLSLHAG AAGRVALAYF EDADAERYLA GAPFPAYNEN TLVSVEQLRE
DIRLTRERGY ALSDEDVTLG VGAVGVPIVD NESGRVIASL SAGGFVDEVL ATQESLAALL
HDGVHEIQAA
|
|---|
| |